Cluster: HRGMv2_0328_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0328
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0328_3 | HRGMv2_0328_3_89 | 131157 | 134240 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0328_3 | HRGMv2_0328_3_90 | 134268 | 135785 | + | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0328_3 | HRGMv2_0328_3_91 | 135884 | 136147 | + | 2.A.124.1.2 |
| TC | HRGMv2_0328_3 | HRGMv2_0328_3_92 | 136219 | 136821 | + | 2.A.124.1.2 |
| CAZyme | HRGMv2_0328_3 | HRGMv2_0328_3_93 | 136906 | 140040 | + | GH2 |
| CAZyme | HRGMv2_0328_3 | HRGMv2_0328_3_94 | 140073 | 141989 | + | GH63 |
Gene ID: HRGMv2_0328_3_89
Type: TC
Location: 131157 - 134240 (+)
Type: TC
Location: 131157 - 134240 (+)
Gene ID: HRGMv2_0328_3_90
Type: pfam
Location: 134268 - 135785 (+)
Type: pfam
Location: 134268 - 135785 (+)
Gene ID: HRGMv2_0328_3_91
Type: TC
Location: 135884 - 136147 (+)
Type: TC
Location: 135884 - 136147 (+)
Gene ID: HRGMv2_0328_3_92
Type: TC
Location: 136219 - 136821 (+)
Type: TC
Location: 136219 - 136821 (+)
Gene ID: HRGMv2_0328_3_93
Type: CAZyme
Location: 136906 - 140040 (+)
Type: CAZyme
Location: 136906 - 140040 (+)
Gene ID: HRGMv2_0328_3_94
Type: CAZyme
Location: 140073 - 141989 (+)
Type: CAZyme
Location: 140073 - 141989 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.