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Cluster: HRGMv2_0328_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0328_36 HRGMv2_0328_36_13 9364 9954 + 1.B.44.2.1
TC HRGMv2_0328_36 HRGMv2_0328_36_14 10250 10840 + 1.B.44.2.1
pfam HRGMv2_0328_36 HRGMv2_0328_36_15 11297 12010 + OMP_b-brl_2
CAZyme HRGMv2_0328_36 HRGMv2_0328_36_16 12053 13591 + GH33
TC HRGMv2_0328_36 HRGMv2_0328_36_17 13712 14128 - 1.A.22.1.1
TC HRGMv2_0328_36 HRGMv2_0328_36_18 14140 15183 - 2.A.6.2.18
pfam HRGMv2_0328_36 HRGMv2_0328_36_19 15355 16137 + Acyl-ACP_TE | Acyl-ACP_TE_C
CAZyme HRGMv2_0328_36 HRGMv2_0328_36_20 16178 17128 - GT2
pfam HRGMv2_0328_36 HRGMv2_0328_36_21 17168 17689 - DUF4199
CAZyme HRGMv2_0328_36 HRGMv2_0328_36_22 17698 18639 - GH73
Gene ID: HRGMv2_0328_36_13
Type: TC
Location: 9364 - 9954 (+)
Gene ID: HRGMv2_0328_36_14
Type: TC
Location: 10250 - 10840 (+)
Gene ID: HRGMv2_0328_36_15
Type: pfam
Location: 11297 - 12010 (+)
Gene ID: HRGMv2_0328_36_16
Type: CAZyme
Location: 12053 - 13591 (+)
Gene ID: HRGMv2_0328_36_17
Type: TC
Location: 13712 - 14128 (-)
Gene ID: HRGMv2_0328_36_18
Type: TC
Location: 14140 - 15183 (-)
Gene ID: HRGMv2_0328_36_19
Type: pfam
Location: 15355 - 16137 (+)
Gene ID: HRGMv2_0328_36_20
Type: CAZyme
Location: 16178 - 17128 (-)
Gene ID: HRGMv2_0328_36_21
Type: pfam
Location: 17168 - 17689 (-)
Gene ID: HRGMv2_0328_36_22
Type: CAZyme
Location: 17698 - 18639 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Marinifilaceae
→
Genus
Odoribacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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