Cluster: HRGMv2_0328_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0328
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0328_30 | HRGMv2_0328_30_39 | 44005 | 45486 | - | 9.A.25.1.1 |
| CAZyme | HRGMv2_0328_30 | HRGMv2_0328_30_40 | 45488 | 46537 | - | GH16 |
| pfam | HRGMv2_0328_30 | HRGMv2_0328_30_41 | 46634 | 47473 | - | GldN |
| TC | HRGMv2_0328_30 | HRGMv2_0328_30_42 | 47488 | 49026 | - | 9.A.25.1.1 |
| TC | HRGMv2_0328_30 | HRGMv2_0328_30_43 | 49040 | 49993 | - | 9.A.25.1.1 |
| TC | HRGMv2_0328_30 | HRGMv2_0328_30_44 | 50007 | 50381 | - | 9.A.25.1.1 |
Gene ID: HRGMv2_0328_30_39
Type: TC
Location: 44005 - 45486 (-)
Type: TC
Location: 44005 - 45486 (-)
Gene ID: HRGMv2_0328_30_40
Type: CAZyme
Location: 45488 - 46537 (-)
Type: CAZyme
Location: 45488 - 46537 (-)
Gene ID: HRGMv2_0328_30_41
Type: pfam
Location: 46634 - 47473 (-)
Type: pfam
Location: 46634 - 47473 (-)
Gene ID: HRGMv2_0328_30_42
Type: TC
Location: 47488 - 49026 (-)
Type: TC
Location: 47488 - 49026 (-)
Gene ID: HRGMv2_0328_30_43
Type: TC
Location: 49040 - 49993 (-)
Type: TC
Location: 49040 - 49993 (-)
Gene ID: HRGMv2_0328_30_44
Type: TC
Location: 50007 - 50381 (-)
Type: TC
Location: 50007 - 50381 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.