Cluster: HRGMv2_0328_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0328
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0328_29 | HRGMv2_0328_29_40 | 43432 | 44460 | + | 9.B.33.1.1 |
| TF | HRGMv2_0328_29 | HRGMv2_0328_29_41 | 44464 | 45216 | + | LytTR |
| TC | HRGMv2_0328_29 | HRGMv2_0328_29_42 | 45382 | 46740 | - | 2.A.6.2.23 |
| CAZyme | HRGMv2_0328_29 | HRGMv2_0328_29_43 | 46877 | 48937 | - | GH29 |
| TC | HRGMv2_0328_29 | HRGMv2_0328_29_44 | 48942 | 50585 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_0328_29_40
Type: TC
Location: 43432 - 44460 (+)
Type: TC
Location: 43432 - 44460 (+)
Gene ID: HRGMv2_0328_29_41
Type: TF
Location: 44464 - 45216 (+)
Type: TF
Location: 44464 - 45216 (+)
Gene ID: HRGMv2_0328_29_42
Type: TC
Location: 45382 - 46740 (-)
Type: TC
Location: 45382 - 46740 (-)
Gene ID: HRGMv2_0328_29_43
Type: CAZyme
Location: 46877 - 48937 (-)
Type: CAZyme
Location: 46877 - 48937 (-)
Gene ID: HRGMv2_0328_29_44
Type: TC
Location: 48942 - 50585 (-)
Type: TC
Location: 48942 - 50585 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.