Cluster: HRGMv2_0328_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0328
- CGC Family ID: CGCFAM_07268
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0328_12 | HRGMv2_0328_12_56 | 67502 | 69805 | - | 1.B.14.1.13 |
| TC | HRGMv2_0328_12 | HRGMv2_0328_12_57 | 70197 | 71393 | + | 2.A.1.36.1 |
| CAZyme | HRGMv2_0328_12 | HRGMv2_0328_12_58 | 71462 | 73600 | - | GH97 |
Gene ID: HRGMv2_0328_12_56
Type: TC
Location: 67502 - 69805 (-)
Type: TC
Location: 67502 - 69805 (-)
Gene ID: HRGMv2_0328_12_57
Type: TC
Location: 70197 - 71393 (+)
Type: TC
Location: 70197 - 71393 (+)
Gene ID: HRGMv2_0328_12_58
Type: CAZyme
Location: 71462 - 73600 (-)
Type: CAZyme
Location: 71462 - 73600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0328_12_58 | vegetarian > omnivore | 1.15403 | 0.03201 |