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Cluster: HRGMv2_0326_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0326_5 HRGMv2_0326_5_82 96329 98014 - 3.A.1.120.6
pfam HRGMv2_0326_5 HRGMv2_0326_5_83 98049 98612 - Pep_deformylase
pfam HRGMv2_0326_5 HRGMv2_0326_5_84 98609 99037 - RuvX
CAZyme HRGMv2_0326_5 HRGMv2_0326_5_85 99224 102274 + PL11
CAZyme HRGMv2_0326_5 HRGMv2_0326_5_86 102305 105460 + PL11_1
CAZyme HRGMv2_0326_5 HRGMv2_0326_5_87 105841 108048 - GH3
CAZyme HRGMv2_0326_5 HRGMv2_0326_5_88 108078 110951 - GH31_4
Gene ID: HRGMv2_0326_5_82
Type: TC
Location: 96329 - 98014 (-)
Gene ID: HRGMv2_0326_5_83
Type: pfam
Location: 98049 - 98612 (-)
Gene ID: HRGMv2_0326_5_84
Type: pfam
Location: 98609 - 99037 (-)
Gene ID: HRGMv2_0326_5_85
Type: CAZyme
Location: 99224 - 102274 (+)
Gene ID: HRGMv2_0326_5_86
Type: CAZyme
Location: 102305 - 105460 (+)
Gene ID: HRGMv2_0326_5_87
Type: CAZyme
Location: 105841 - 108048 (-)
Gene ID: HRGMv2_0326_5_88
Type: CAZyme
Location: 108078 - 110951 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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