Cluster: HRGMv2_0326_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0326
- CGC Family ID: CGCFAM_00900
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0326_3 | HRGMv2_0326_3_74 | 93366 | 94400 | + | 2.A.7.6.1 |
| pfam | HRGMv2_0326_3 | HRGMv2_0326_3_75 | 94440 | 95249 | + | Aldolase_II |
| CAZyme | HRGMv2_0326_3 | HRGMv2_0326_3_76 | 95280 | 96593 | + | GH105 |
| CAZyme | HRGMv2_0326_3 | HRGMv2_0326_3_77 | 96672 | 98105 | + | GH28 |
| NULL(UNKNOWN) | HRGMv2_0326_3 | HRGMv2_0326_3_78 | 98485 | 100632 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0326_3 | HRGMv2_0326_3_79 | 100687 | 103095 | + | Fasciclin |
| TC | HRGMv2_0326_3 | HRGMv2_0326_3_80 | 103102 | 106410 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0326_3_74
Type: TC
Location: 93366 - 94400 (+)
Type: TC
Location: 93366 - 94400 (+)
Gene ID: HRGMv2_0326_3_75
Type: pfam
Location: 94440 - 95249 (+)
Type: pfam
Location: 94440 - 95249 (+)
Gene ID: HRGMv2_0326_3_76
Type: CAZyme
Location: 95280 - 96593 (+)
Type: CAZyme
Location: 95280 - 96593 (+)
Gene ID: HRGMv2_0326_3_77
Type: CAZyme
Location: 96672 - 98105 (+)
Type: CAZyme
Location: 96672 - 98105 (+)
Gene ID: HRGMv2_0326_3_78
Type:
Location: 98485 - 100632 (+)
Type:
Location: 98485 - 100632 (+)
Gene ID: HRGMv2_0326_3_79
Type: pfam
Location: 100687 - 103095 (+)
Type: pfam
Location: 100687 - 103095 (+)
Gene ID: HRGMv2_0326_3_80
Type: TC
Location: 103102 - 106410 (+)
Type: TC
Location: 103102 - 106410 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp905210875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.