Cluster: HRGMv2_0326_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0326_2 | HRGMv2_0326_2_112 | 133865 | 134233 | + | 2.A.7.34.3 |
| CAZyme | HRGMv2_0326_2 | HRGMv2_0326_2_113 | 134318 | 136498 | + | CBM77 | PL1 |
| TF | HRGMv2_0326_2 | HRGMv2_0326_2_114 | 136726 | 141009 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0326_2 | HRGMv2_0326_2_115 | 141084 | 143357 | + | PL1_2 |
| CAZyme | HRGMv2_0326_2 | HRGMv2_0326_2_116 | 143376 | 147149 | + | CE8 |
Gene ID: HRGMv2_0326_2_112
Type: TC
Location: 133865 - 134233 (+)
Type: TC
Location: 133865 - 134233 (+)
Gene ID: HRGMv2_0326_2_113
Type: CAZyme
Location: 134318 - 136498 (+)
Type: CAZyme
Location: 134318 - 136498 (+)
Gene ID: HRGMv2_0326_2_114
Type: TF
Location: 136726 - 141009 (+)
Type: TF
Location: 136726 - 141009 (+)
Gene ID: HRGMv2_0326_2_115
Type: CAZyme
Location: 141084 - 143357 (+)
Type: CAZyme
Location: 141084 - 143357 (+)
Gene ID: HRGMv2_0326_2_116
Type: CAZyme
Location: 143376 - 147149 (+)
Type: CAZyme
Location: 143376 - 147149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp905210875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0326_2_112 | vegetarian > vegan | 1.38980 | 0.00536 |