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Cluster: HRGMv2_0326_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0326_43 HRGMv2_0326_43_1 2 1177 + 2.A.40.7.6
pfam HRGMv2_0326_43 HRGMv2_0326_43_2 1189 1452 + Acetyltransf_1 | Acetyltransf_CG
sulfatase HRGMv2_0326_43 HRGMv2_0326_43_3 1412 2101 + S1_14
CAZyme HRGMv2_0326_43 HRGMv2_0326_43_4 2113 3180 + GH43_19
TF HRGMv2_0326_43 HRGMv2_0326_43_5 3258 4154 - HTH_AraC
TC HRGMv2_0326_43 HRGMv2_0326_43_6 4482 5555 + 2.A.6.2.28
TC HRGMv2_0326_43 HRGMv2_0326_43_7 5571 8600 + 2.A.6.2.33
Gene ID: HRGMv2_0326_43_1
Type: TC
Location: 2 - 1177 (+)
Gene ID: HRGMv2_0326_43_2
Type: pfam
Location: 1189 - 1452 (+)
Gene ID: HRGMv2_0326_43_3
Type: sulfatase
Location: 1412 - 2101 (+)
Gene ID: HRGMv2_0326_43_4
Type: CAZyme
Location: 2113 - 3180 (+)
Gene ID: HRGMv2_0326_43_5
Type: TF
Location: 3258 - 4154 (-)
Gene ID: HRGMv2_0326_43_6
Type: TC
Location: 4482 - 5555 (+)
Gene ID: HRGMv2_0326_43_7
Type: TC
Location: 5571 - 8600 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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