Cluster: HRGMv2_0326_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0326_31 | HRGMv2_0326_31_12 | 9382 | 10050 | + | 9.B.20.1.4 |
| TC | HRGMv2_0326_31 | HRGMv2_0326_31_13 | 10480 | 12672 | + | 3.A.3.5.15 |
| NULL(UNKNOWN) | HRGMv2_0326_31 | HRGMv2_0326_31_14 | 12738 | 12947 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0326_31 | HRGMv2_0326_31_15 | 13080 | 14687 | + | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369 |
| CAZyme | HRGMv2_0326_31 | HRGMv2_0326_31_16 | 14905 | 16038 | + | PL10_1 |
Gene ID: HRGMv2_0326_31_12
Type: TC
Location: 9382 - 10050 (+)
Type: TC
Location: 9382 - 10050 (+)
Gene ID: HRGMv2_0326_31_13
Type: TC
Location: 10480 - 12672 (+)
Type: TC
Location: 10480 - 12672 (+)
Gene ID: HRGMv2_0326_31_14
Type:
Location: 12738 - 12947 (+)
Type:
Location: 12738 - 12947 (+)
Gene ID: HRGMv2_0326_31_15
Type: pfam
Location: 13080 - 14687 (+)
Type: pfam
Location: 13080 - 14687 (+)
Gene ID: HRGMv2_0326_31_16
Type: CAZyme
Location: 14905 - 16038 (+)
Type: CAZyme
Location: 14905 - 16038 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp905210875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.