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Cluster: HRGMv2_0326_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0326_23 HRGMv2_0326_23_18 18655 21756 + GH2
pfam HRGMv2_0326_23 HRGMv2_0326_23_19 22109 22594 + PNPOx_N | Pyridox_ox_2
CAZyme HRGMv2_0326_23 HRGMv2_0326_23_20 22690 23628 + GT2
CAZyme HRGMv2_0326_23 HRGMv2_0326_23_21 23709 25115 - CE19
peptidase HRGMv2_0326_23 HRGMv2_0326_23_22 25344 26201 + M24.001
CAZyme HRGMv2_0326_23 HRGMv2_0326_23_23 26287 28185 + PL10_1
TC HRGMv2_0326_23 HRGMv2_0326_23_24 28266 29558 - 9.A.40.2.4
TC HRGMv2_0326_23 HRGMv2_0326_23_25 30001 30672 + 2.A.115.2.10
CAZyme HRGMv2_0326_23 HRGMv2_0326_23_26 30760 31914 - GH105
sulfatase HRGMv2_0326_23 HRGMv2_0326_23_27 32162 33013 + S1_6
CAZyme HRGMv2_0326_23 HRGMv2_0326_23_28 33158 34729 - GH28
Gene ID: HRGMv2_0326_23_18
Type: CAZyme
Location: 18655 - 21756 (+)
Gene ID: HRGMv2_0326_23_19
Type: pfam
Location: 22109 - 22594 (+)
Gene ID: HRGMv2_0326_23_20
Type: CAZyme
Location: 22690 - 23628 (+)
Gene ID: HRGMv2_0326_23_21
Type: CAZyme
Location: 23709 - 25115 (-)
Gene ID: HRGMv2_0326_23_22
Type: peptidase
Location: 25344 - 26201 (+)
Gene ID: HRGMv2_0326_23_23
Type: CAZyme
Location: 26287 - 28185 (+)
Gene ID: HRGMv2_0326_23_24
Type: TC
Location: 28266 - 29558 (-)
Gene ID: HRGMv2_0326_23_25
Type: TC
Location: 30001 - 30672 (+)
Gene ID: HRGMv2_0326_23_26
Type: CAZyme
Location: 30760 - 31914 (-)
Gene ID: HRGMv2_0326_23_27
Type: sulfatase
Location: 32162 - 33013 (+)
Gene ID: HRGMv2_0326_23_28
Type: CAZyme
Location: 33158 - 34729 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0326_23_22 vegan > omnivore 1.78276 0.01492
HRGMv2_0326_23_22 vegetarian > omnivore 1.56815 0.04449

🧭 Explore Read Mapping of CGC

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