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Cluster: HRGMv2_0326_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0326_2 HRGMv2_0326_2_80 91507 92676 - GH171
NULL(UNKNOWN) HRGMv2_0326_2 HRGMv2_0326_2_81 92995 93483 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0326_2 HRGMv2_0326_2_82 93570 94769 - GT2
pfam HRGMv2_0326_2 HRGMv2_0326_2_83 95015 95818 + Poly_export | SLBB_2
TC HRGMv2_0326_2 HRGMv2_0326_2_84 95843 98161 + 8.A.3.3.4
NULL(UNKNOWN) HRGMv2_0326_2 HRGMv2_0326_2_85 98334 99779 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0326_2 HRGMv2_0326_2_86 99776 100816 + GT4
CAZyme HRGMv2_0326_2 HRGMv2_0326_2_87 100877 101893 + GT4
CAZyme HRGMv2_0326_2 HRGMv2_0326_2_88 102177 102872 + GT26
pfam HRGMv2_0326_2 HRGMv2_0326_2_89 103022 103450 + Lipocalin_8
TC HRGMv2_0326_2 HRGMv2_0326_2_90 103456 104919 + 1.B.73.2.2
Gene ID: HRGMv2_0326_2_80
Type: CAZyme
Location: 91507 - 92676 (-)
Gene ID: HRGMv2_0326_2_81
Type:
Location: 92995 - 93483 (+)
Gene ID: HRGMv2_0326_2_82
Type: CAZyme
Location: 93570 - 94769 (-)
Gene ID: HRGMv2_0326_2_83
Type: pfam
Location: 95015 - 95818 (+)
Gene ID: HRGMv2_0326_2_84
Type: TC
Location: 95843 - 98161 (+)
Gene ID: HRGMv2_0326_2_85
Type:
Location: 98334 - 99779 (+)
Gene ID: HRGMv2_0326_2_86
Type: CAZyme
Location: 99776 - 100816 (+)
Gene ID: HRGMv2_0326_2_87
Type: CAZyme
Location: 100877 - 101893 (+)
Gene ID: HRGMv2_0326_2_88
Type: CAZyme
Location: 102177 - 102872 (+)
Gene ID: HRGMv2_0326_2_89
Type: pfam
Location: 103022 - 103450 (+)
Gene ID: HRGMv2_0326_2_90
Type: TC
Location: 103456 - 104919 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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