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Cluster: HRGMv2_0326_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0326_21 HRGMv2_0326_21_28 28105 29691 + GH23
CAZyme HRGMv2_0326_21 HRGMv2_0326_21_29 29796 31445 + CE12 | CE8
CAZyme HRGMv2_0326_21 HRGMv2_0326_21_30 31470 32984 + GH105
CAZyme HRGMv2_0326_21 HRGMv2_0326_21_31 32991 34220 + GH105
pfam HRGMv2_0326_21 HRGMv2_0326_21_32 34374 34577 + DUF2582
CAZyme HRGMv2_0326_21 HRGMv2_0326_21_33 34737 35720 + CE8
CAZyme HRGMv2_0326_21 HRGMv2_0326_21_34 35759 37423 + CBM91 | GH43_10
pfam HRGMv2_0326_21 HRGMv2_0326_21_35 37511 38701 + ATP-grasp | CPSase_L_D2 | Dala_Dala_lig_C | PurT_C | RS_preATP-grasp-like
TC HRGMv2_0326_21 HRGMv2_0326_21_36 38817 39926 - 3.A.1.132.3
Gene ID: HRGMv2_0326_21_28
Type: CAZyme
Location: 28105 - 29691 (+)
Gene ID: HRGMv2_0326_21_29
Type: CAZyme
Location: 29796 - 31445 (+)
Gene ID: HRGMv2_0326_21_30
Type: CAZyme
Location: 31470 - 32984 (+)
Gene ID: HRGMv2_0326_21_31
Type: CAZyme
Location: 32991 - 34220 (+)
Gene ID: HRGMv2_0326_21_32
Type: pfam
Location: 34374 - 34577 (+)
Gene ID: HRGMv2_0326_21_33
Type: CAZyme
Location: 34737 - 35720 (+)
Gene ID: HRGMv2_0326_21_34
Type: CAZyme
Location: 35759 - 37423 (+)
Gene ID: HRGMv2_0326_21_35
Type: pfam
Location: 37511 - 38701 (+)
Gene ID: HRGMv2_0326_21_36
Type: TC
Location: 38817 - 39926 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0326_21_32 vegetarian > vegan 17.53921 0.00536

🧭 Explore Read Mapping of CGC

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