Cluster: HRGMv2_0326_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0326
- CGC Family ID: CGCFAM_05982
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0326_20 | HRGMv2_0326_20_6 | 3374 | 4558 | - | 2.A.1.46.5 |
| NULL(UNKNOWN) | HRGMv2_0326_20 | HRGMv2_0326_20_7 | 4659 | 4931 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0326_20 | HRGMv2_0326_20_8 | 4966 | 5541 | + | Ferritin | Rubrerythrin | RUBY_RBDX |
| CAZyme | HRGMv2_0326_20 | HRGMv2_0326_20_9 | 5621 | 7183 | - | CBM91 | GH43_10 |
| NULL(UNKNOWN) | HRGMv2_0326_20 | HRGMv2_0326_20_10 | 7405 | 7950 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0326_20 | HRGMv2_0326_20_11 | 8020 | 9606 | - | 3.D.10.1.4 |
Gene ID: HRGMv2_0326_20_6
Type: TC
Location: 3374 - 4558 (-)
Type: TC
Location: 3374 - 4558 (-)
Gene ID: HRGMv2_0326_20_7
Type:
Location: 4659 - 4931 (-)
Type:
Location: 4659 - 4931 (-)
Gene ID: HRGMv2_0326_20_8
Type: pfam
Location: 4966 - 5541 (+)
Type: pfam
Location: 4966 - 5541 (+)
Gene ID: HRGMv2_0326_20_9
Type: CAZyme
Location: 5621 - 7183 (-)
Type: CAZyme
Location: 5621 - 7183 (-)
Gene ID: HRGMv2_0326_20_10
Type:
Location: 7405 - 7950 (+)
Type:
Location: 7405 - 7950 (+)
Gene ID: HRGMv2_0326_20_11
Type: TC
Location: 8020 - 9606 (-)
Type: TC
Location: 8020 - 9606 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp905210875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.