dbCAN Logo

Cluster: HRGMv2_0326_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0326_18 HRGMv2_0326_18_13 16746 17129 + 9.B.124.1.3
pfam HRGMv2_0326_18 HRGMv2_0326_18_14 17214 19310 - DEAD | Helicase_C | ResIII | RecG_wedge | RecG_dom3_C
pfam HRGMv2_0326_18 HRGMv2_0326_18_15 19303 19980 - IspD | NTP_transf_3
CAZyme HRGMv2_0326_18 HRGMv2_0326_18_16 20271 21188 + CBM50
pfam HRGMv2_0326_18 HRGMv2_0326_18_17 21245 24463 + MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C
TC HRGMv2_0326_18 HRGMv2_0326_18_18 24765 26966 + 3.A.10.1.10
Gene ID: HRGMv2_0326_18_13
Type: TC
Location: 16746 - 17129 (+)
Gene ID: HRGMv2_0326_18_14
Type: pfam
Location: 17214 - 19310 (-)
Gene ID: HRGMv2_0326_18_15
Type: pfam
Location: 19303 - 19980 (-)
Gene ID: HRGMv2_0326_18_16
Type: CAZyme
Location: 20271 - 21188 (+)
Gene ID: HRGMv2_0326_18_17
Type: pfam
Location: 21245 - 24463 (+)
Gene ID: HRGMv2_0326_18_18
Type: TC
Location: 24765 - 26966 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List