Cluster: HRGMv2_0326_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0326
- CGC Family ID: CGCFAM_03993
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0326_8 | HRGMv2_0326_8_6 | 7752 | 9323 | + | 2.A.1.3.17 |
| CAZyme | HRGMv2_0326_8 | HRGMv2_0326_8_7 | 9515 | 11290 | + | GH78 |
| STP | HRGMv2_0326_8 | HRGMv2_0326_8_8 | 11292 | 13706 | - | HD |
| pfam | HRGMv2_0326_8 | HRGMv2_0326_8_9 | 13740 | 14738 | - | PFK |
| CAZyme | HRGMv2_0326_8 | HRGMv2_0326_8_10 | 15005 | 16426 | - | PL1 |
Gene ID: HRGMv2_0326_8_6
Type: TC
Location: 7752 - 9323 (+)
Type: TC
Location: 7752 - 9323 (+)
Gene ID: HRGMv2_0326_8_7
Type: CAZyme
Location: 9515 - 11290 (+)
Type: CAZyme
Location: 9515 - 11290 (+)
Gene ID: HRGMv2_0326_8_8
Type: STP
Location: 11292 - 13706 (-)
Type: STP
Location: 11292 - 13706 (-)
Gene ID: HRGMv2_0326_8_9
Type: pfam
Location: 13740 - 14738 (-)
Type: pfam
Location: 13740 - 14738 (-)
Gene ID: HRGMv2_0326_8_10
Type: CAZyme
Location: 15005 - 16426 (-)
Type: CAZyme
Location: 15005 - 16426 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp905210875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0326_8_8 | vegetarian > vegan | 1.14801 | 0.00536 |