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Cluster: HRGMv2_0326_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0326_1 HRGMv2_0326_1_62 68946 69788 + GT2
CAZyme HRGMv2_0326_1 HRGMv2_0326_1_63 69795 70715 + GT11
CAZyme HRGMv2_0326_1 HRGMv2_0326_1_64 70864 71970 + GT4
pfam HRGMv2_0326_1 HRGMv2_0326_1_65 71967 73079 + PS_pyruv_trans
STP HRGMv2_0326_1 HRGMv2_0326_1_66 73081 74190 + Fer4
CAZyme HRGMv2_0326_1 HRGMv2_0326_1_67 74229 75347 + GT4
CAZyme HRGMv2_0326_1 HRGMv2_0326_1_68 75387 76106 + GT26
NULL(UNKNOWN) HRGMv2_0326_1 HRGMv2_0326_1_69 76159 76359 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0326_1 HRGMv2_0326_1_70 76505 77704 + Aminotran_1_2
TC HRGMv2_0326_1 HRGMv2_0326_1_71 77701 78948 + 3.A.1.125.1
Gene ID: HRGMv2_0326_1_62
Type: CAZyme
Location: 68946 - 69788 (+)
Gene ID: HRGMv2_0326_1_63
Type: CAZyme
Location: 69795 - 70715 (+)
Gene ID: HRGMv2_0326_1_64
Type: CAZyme
Location: 70864 - 71970 (+)
Gene ID: HRGMv2_0326_1_65
Type: pfam
Location: 71967 - 73079 (+)
Gene ID: HRGMv2_0326_1_66
Type: STP
Location: 73081 - 74190 (+)
Gene ID: HRGMv2_0326_1_67
Type: CAZyme
Location: 74229 - 75347 (+)
Gene ID: HRGMv2_0326_1_68
Type: CAZyme
Location: 75387 - 76106 (+)
Gene ID: HRGMv2_0326_1_69
Type:
Location: 76159 - 76359 (+)
Gene ID: HRGMv2_0326_1_70
Type: STP
Location: 76505 - 77704 (+)
Gene ID: HRGMv2_0326_1_71
Type: TC
Location: 77701 - 78948 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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