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Cluster: HRGMv2_0325_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0325_1 HRGMv2_0325_1_335 410607 411824 + 9.A.40.1.2
NULL(UNKNOWN) HRGMv2_0325_1 HRGMv2_0325_1_336 411817 412413 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0325_1 HRGMv2_0325_1_337 412400 413056 + ACPS
CAZyme HRGMv2_0325_1 HRGMv2_0325_1_338 413143 414141 - GT2
pfam HRGMv2_0325_1 HRGMv2_0325_1_339 414151 415047 - Lip_A_acyltrans
pfam HRGMv2_0325_1 HRGMv2_0325_1_340 415051 416376 - UPF0004 | Radical_SAM
CAZyme HRGMv2_0325_1 HRGMv2_0325_1_341 416538 417599 - GH43_1
TC HRGMv2_0325_1 HRGMv2_0325_1_342 417978 419663 + 4.C.1.1.7
Gene ID: HRGMv2_0325_1_335
Type: TC
Location: 410607 - 411824 (+)
Gene ID: HRGMv2_0325_1_336
Type:
Location: 411817 - 412413 (+)
Gene ID: HRGMv2_0325_1_337
Type: pfam
Location: 412400 - 413056 (+)
Gene ID: HRGMv2_0325_1_338
Type: CAZyme
Location: 413143 - 414141 (-)
Gene ID: HRGMv2_0325_1_339
Type: pfam
Location: 414151 - 415047 (-)
Gene ID: HRGMv2_0325_1_340
Type: pfam
Location: 415051 - 416376 (-)
Gene ID: HRGMv2_0325_1_341
Type: CAZyme
Location: 416538 - 417599 (-)
Gene ID: HRGMv2_0325_1_342
Type: TC
Location: 417978 - 419663 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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