dbCAN HGM

Cluster: HRGMv2_0325_CGC8

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0325_1	HRGMv2_0325_1_314	388457	389566	+	3.A.1.132.3
pfam	HRGMv2_0325_1	HRGMv2_0325_1_315	389684	390874	-	ATP-grasp \| CPSase_L_D2 \| Dala_Dala_lig_C \| PurT_C \| RS_preATP-grasp-like
CAZyme	HRGMv2_0325_1	HRGMv2_0325_1_316	390962	392626	-	CBM91 \| GH43_10
CAZyme	HRGMv2_0325_1	HRGMv2_0325_1_317	392662	393645	-	CE8
pfam	HRGMv2_0325_1	HRGMv2_0325_1_318	393803	394006	-	DUF2582
CAZyme	HRGMv2_0325_1	HRGMv2_0325_1_319	394158	395387	-	GH105
CAZyme	HRGMv2_0325_1	HRGMv2_0325_1_320	395394	396908	-	GH105
CAZyme	HRGMv2_0325_1	HRGMv2_0325_1_321	396933	398582	-	CE12 \| CE8
CAZyme	HRGMv2_0325_1	HRGMv2_0325_1_322	398686	400272	-	GH23
pfam	HRGMv2_0325_1	HRGMv2_0325_1_323	400291	401070	-	DUF5683
pfam	HRGMv2_0325_1	HRGMv2_0325_1_324	401080	401961	-	ParBc \| HTH_ParB \| ParB_dimer
TC	HRGMv2_0325_1	HRGMv2_0325_1_325	402003	402776	-	3.A.7.11.1

Gene ID: HRGMv2_0325_1_314
Type: TC
Location: 388457 - 389566 (+)

Gene ID: HRGMv2_0325_1_315
Type: pfam
Location: 389684 - 390874 (-)

Gene ID: HRGMv2_0325_1_316
Type: CAZyme
Location: 390962 - 392626 (-)

Gene ID: HRGMv2_0325_1_317
Type: CAZyme
Location: 392662 - 393645 (-)

Gene ID: HRGMv2_0325_1_318
Type: pfam
Location: 393803 - 394006 (-)

Gene ID: HRGMv2_0325_1_319
Type: CAZyme
Location: 394158 - 395387 (-)

Gene ID: HRGMv2_0325_1_320
Type: CAZyme
Location: 395394 - 396908 (-)

Gene ID: HRGMv2_0325_1_321
Type: CAZyme
Location: 396933 - 398582 (-)

Gene ID: HRGMv2_0325_1_322
Type: CAZyme
Location: 398686 - 400272 (-)

Gene ID: HRGMv2_0325_1_323
Type: pfam
Location: 400291 - 401070 (-)

Gene ID: HRGMv2_0325_1_324
Type: pfam
Location: 401080 - 401961 (-)

Gene ID: HRGMv2_0325_1_325
Type: TC
Location: 402003 - 402776 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0325_1_315	vegetarian > vegan	1.39374	0.00565
HRGMv2_0325_1_318	vegetarian > vegan	17.02636	0.00565
HRGMv2_0325_1_324	vegetarian > vegan	1.00813	0.00565