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Cluster: HRGMv2_0325_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0325_1 HRGMv2_0325_1_196 253971 255848 - 1.C.39.4.5
pfam HRGMv2_0325_1 HRGMv2_0325_1_197 255852 256307 - YbeY
TC HRGMv2_0325_1 HRGMv2_0325_1_198 256426 257658 - 9.B.156.3.1
pfam HRGMv2_0325_1 HRGMv2_0325_1_199 257856 258824 + 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored
pfam HRGMv2_0325_1 HRGMv2_0325_1_200 258837 259568 + DNA_alkylation
CAZyme HRGMv2_0325_1 HRGMv2_0325_1_201 259781 260530 - GT2
TC HRGMv2_0325_1 HRGMv2_0325_1_202 260535 262004 - 2.A.66.2.23
pfam HRGMv2_0325_1 HRGMv2_0325_1_203 262063 264102 - tRNA-synt_1 | tRNA_bind | Anticodon_1 | tRNA-synt_1g | Anticodon_3
pfam HRGMv2_0325_1 HRGMv2_0325_1_204 264135 265643 - GH3 | GH3_M | GH3_C
TC HRGMv2_0325_1 HRGMv2_0325_1_205 265703 267487 - 1.I.1.1.3
Gene ID: HRGMv2_0325_1_196
Type: TC
Location: 253971 - 255848 (-)
Gene ID: HRGMv2_0325_1_197
Type: pfam
Location: 255852 - 256307 (-)
Gene ID: HRGMv2_0325_1_198
Type: TC
Location: 256426 - 257658 (-)
Gene ID: HRGMv2_0325_1_199
Type: pfam
Location: 257856 - 258824 (+)
Gene ID: HRGMv2_0325_1_200
Type: pfam
Location: 258837 - 259568 (+)
Gene ID: HRGMv2_0325_1_201
Type: CAZyme
Location: 259781 - 260530 (-)
Gene ID: HRGMv2_0325_1_202
Type: TC
Location: 260535 - 262004 (-)
Gene ID: HRGMv2_0325_1_203
Type: pfam
Location: 262063 - 264102 (-)
Gene ID: HRGMv2_0325_1_204
Type: pfam
Location: 264135 - 265643 (-)
Gene ID: HRGMv2_0325_1_205
Type: TC
Location: 265703 - 267487 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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