Cluster: HRGMv2_0325_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0325
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0325_1 | HRGMv2_0325_1_153 | 192395 | 193270 | - | 2.A.115.1.5 |
| CAZyme | HRGMv2_0325_1 | HRGMv2_0325_1_154 | 193487 | 194869 | - | GH29 |
| NULL(UNKNOWN) | HRGMv2_0325_1 | HRGMv2_0325_1_155 | 194876 | 194992 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0325_1 | HRGMv2_0325_1_156 | 195040 | 196536 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0325_1 | HRGMv2_0325_1_157 | 196604 | 199408 | - | 1.B.14.12.3 |
Gene ID: HRGMv2_0325_1_153
Type: TC
Location: 192395 - 193270 (-)
Type: TC
Location: 192395 - 193270 (-)
Gene ID: HRGMv2_0325_1_154
Type: CAZyme
Location: 193487 - 194869 (-)
Type: CAZyme
Location: 193487 - 194869 (-)
Gene ID: HRGMv2_0325_1_155
Type:
Location: 194876 - 194992 (+)
Type:
Location: 194876 - 194992 (+)
Gene ID: HRGMv2_0325_1_156
Type:
Location: 195040 - 196536 (-)
Type:
Location: 195040 - 196536 (-)
Gene ID: HRGMv2_0325_1_157
Type: TC
Location: 196604 - 199408 (-)
Type: TC
Location: 196604 - 199408 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp944325415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0325_1_156 | vegetarian > vegan | 1.93520 | 0.00565 |
| HRGMv2_0325_1_157 | vegetarian > vegan | 2.22655 | 0.00565 |