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Cluster: HRGMv2_0325_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0325_7 HRGMv2_0325_7_3 1574 2728 + GH105
TC HRGMv2_0325_7 HRGMv2_0325_7_4 2810 3481 - 2.A.115.2.8
TC HRGMv2_0325_7 HRGMv2_0325_7_5 3826 5118 + 9.A.40.1.2
CAZyme HRGMv2_0325_7 HRGMv2_0325_7_6 5198 7096 - PL10_1
peptidase HRGMv2_0325_7 HRGMv2_0325_7_7 7177 8034 - M24.001
CAZyme HRGMv2_0325_7 HRGMv2_0325_7_8 8263 9669 + CE19
CAZyme HRGMv2_0325_7 HRGMv2_0325_7_9 9750 10688 - GT2
pfam HRGMv2_0325_7 HRGMv2_0325_7_10 10785 11270 - PNPOx_N | Pyridox_ox_2
CAZyme HRGMv2_0325_7 HRGMv2_0325_7_11 11706 14807 - GH2
STP HRGMv2_0325_7 HRGMv2_0325_7_12 15110 15592 + AraC_binding
pfam HRGMv2_0325_7 HRGMv2_0325_7_13 15747 16583 + CMD | CMD
CAZyme HRGMv2_0325_7 HRGMv2_0325_7_14 16684 19995 - CE8
Gene ID: HRGMv2_0325_7_3
Type: CAZyme
Location: 1574 - 2728 (+)
Gene ID: HRGMv2_0325_7_4
Type: TC
Location: 2810 - 3481 (-)
Gene ID: HRGMv2_0325_7_5
Type: TC
Location: 3826 - 5118 (+)
Gene ID: HRGMv2_0325_7_6
Type: CAZyme
Location: 5198 - 7096 (-)
Gene ID: HRGMv2_0325_7_7
Type: peptidase
Location: 7177 - 8034 (-)
Gene ID: HRGMv2_0325_7_8
Type: CAZyme
Location: 8263 - 9669 (+)
Gene ID: HRGMv2_0325_7_9
Type: CAZyme
Location: 9750 - 10688 (-)
Gene ID: HRGMv2_0325_7_10
Type: pfam
Location: 10785 - 11270 (-)
Gene ID: HRGMv2_0325_7_11
Type: CAZyme
Location: 11706 - 14807 (-)
Gene ID: HRGMv2_0325_7_12
Type: STP
Location: 15110 - 15592 (+)
Gene ID: HRGMv2_0325_7_13
Type: pfam
Location: 15747 - 16583 (+)
Gene ID: HRGMv2_0325_7_14
Type: CAZyme
Location: 16684 - 19995 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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