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Cluster: HRGMv2_0325_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0325_1 HRGMv2_0325_1_134 168318 169502 - 2.A.1.46.5
pfam HRGMv2_0325_1 HRGMv2_0325_1_135 169832 170407 + Ferritin | Rubrerythrin | RUBY_RBDX
CAZyme HRGMv2_0325_1 HRGMv2_0325_1_136 170489 172051 - CBM91 | GH43_10
NULL(UNKNOWN) HRGMv2_0325_1 HRGMv2_0325_1_137 172274 172819 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0325_1 HRGMv2_0325_1_138 172942 174522 - 3.D.10.1.4
pfam HRGMv2_0325_1 HRGMv2_0325_1_139 174699 175118 + bPH_4
TC HRGMv2_0325_1 HRGMv2_0325_1_140 175186 176229 - 9.A.40.2.2
TC HRGMv2_0325_1 HRGMv2_0325_1_141 176713 178107 - 5.B.3.1.1
TC HRGMv2_0325_1 HRGMv2_0325_1_142 178153 178929 - 9.B.14.3.3
Gene ID: HRGMv2_0325_1_134
Type: TC
Location: 168318 - 169502 (-)
Gene ID: HRGMv2_0325_1_135
Type: pfam
Location: 169832 - 170407 (+)
Gene ID: HRGMv2_0325_1_136
Type: CAZyme
Location: 170489 - 172051 (-)
Gene ID: HRGMv2_0325_1_137
Type:
Location: 172274 - 172819 (+)
Gene ID: HRGMv2_0325_1_138
Type: TC
Location: 172942 - 174522 (-)
Gene ID: HRGMv2_0325_1_139
Type: pfam
Location: 174699 - 175118 (+)
Gene ID: HRGMv2_0325_1_140
Type: TC
Location: 175186 - 176229 (-)
Gene ID: HRGMv2_0325_1_141
Type: TC
Location: 176713 - 178107 (-)
Gene ID: HRGMv2_0325_1_142
Type: TC
Location: 178153 - 178929 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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