Cluster: HRGMv2_0325_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0325
- CGC Family ID: CGCFAM_00188
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0325_4 | HRGMv2_0325_4_172 | 216017 | 216976 | - | 3.A.5.1.1 |
| CAZyme | HRGMv2_0325_4 | HRGMv2_0325_4_173 | 217030 | 219456 | - | GT51 |
| NULL(UNKNOWN) | HRGMv2_0325_4 | HRGMv2_0325_4_174 | 219607 | 221184 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0325_4 | HRGMv2_0325_4_175 | 221191 | 221943 | - | GT2 |
Gene ID: HRGMv2_0325_4_172
Type: TC
Location: 216017 - 216976 (-)
Type: TC
Location: 216017 - 216976 (-)
Gene ID: HRGMv2_0325_4_173
Type: CAZyme
Location: 217030 - 219456 (-)
Type: CAZyme
Location: 217030 - 219456 (-)
Gene ID: HRGMv2_0325_4_174
Type:
Location: 219607 - 221184 (-)
Type:
Location: 219607 - 221184 (-)
Gene ID: HRGMv2_0325_4_175
Type: CAZyme
Location: 221191 - 221943 (-)
Type: CAZyme
Location: 221191 - 221943 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp944325415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0325_4_173 | vegetarian > vegan | 1.65254 | 0.00565 |
| HRGMv2_0325_4_175 | vegetarian > vegan | 16.29402 | 0.00565 |