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Cluster: HRGMv2_0325_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0325_3 HRGMv2_0325_3_346 419563 422349 + PL11_1
STP HRGMv2_0325_3 HRGMv2_0325_3_347 422432 423793 - PALP
CAZyme HRGMv2_0325_3 HRGMv2_0325_3_348 424033 425424 - PL1_2
pfam HRGMv2_0325_3 HRGMv2_0325_3_349 425496 426296 - Sel1 | Sel1 | Sel1 | Sel1 | Sel1 | Sel1
CAZyme HRGMv2_0325_3 HRGMv2_0325_3_350 426308 427909 - GH28
pfam HRGMv2_0325_3 HRGMv2_0325_3_351 428144 429658 - CotH
TC HRGMv2_0325_3 HRGMv2_0325_3_352 429795 432257 + 9.A.8.1.6
TC HRGMv2_0325_3 HRGMv2_0325_3_353 432749 433918 - 2.A.1.2.97
Gene ID: HRGMv2_0325_3_346
Type: CAZyme
Location: 419563 - 422349 (+)
Gene ID: HRGMv2_0325_3_347
Type: STP
Location: 422432 - 423793 (-)
Gene ID: HRGMv2_0325_3_348
Type: CAZyme
Location: 424033 - 425424 (-)
Gene ID: HRGMv2_0325_3_349
Type: pfam
Location: 425496 - 426296 (-)
Gene ID: HRGMv2_0325_3_350
Type: CAZyme
Location: 426308 - 427909 (-)
Gene ID: HRGMv2_0325_3_351
Type: pfam
Location: 428144 - 429658 (-)
Gene ID: HRGMv2_0325_3_352
Type: TC
Location: 429795 - 432257 (+)
Gene ID: HRGMv2_0325_3_353
Type: TC
Location: 432749 - 433918 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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