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Cluster: HRGMv2_0325_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0325_3 HRGMv2_0325_3_218 273469 274932 - 1.B.73.2.2
pfam HRGMv2_0325_3 HRGMv2_0325_3_219 274938 275366 - Lipocalin_8
CAZyme HRGMv2_0325_3 HRGMv2_0325_3_220 275515 276210 - GT26
CAZyme HRGMv2_0325_3 HRGMv2_0325_3_221 276496 277548 - GT4
CAZyme HRGMv2_0325_3 HRGMv2_0325_3_222 277573 278613 - GT4
NULL(UNKNOWN) HRGMv2_0325_3 HRGMv2_0325_3_223 278610 280055 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0325_3 HRGMv2_0325_3_224 280227 282545 - 8.A.3.3.4
pfam HRGMv2_0325_3 HRGMv2_0325_3_225 282570 283373 - Poly_export | SLBB_2
CAZyme HRGMv2_0325_3 HRGMv2_0325_3_226 283618 284817 + GT2
NULL(UNKNOWN) HRGMv2_0325_3 HRGMv2_0325_3_227 284903 285391 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0325_3 HRGMv2_0325_3_228 285710 286879 + GH171
Gene ID: HRGMv2_0325_3_218
Type: TC
Location: 273469 - 274932 (-)
Gene ID: HRGMv2_0325_3_219
Type: pfam
Location: 274938 - 275366 (-)
Gene ID: HRGMv2_0325_3_220
Type: CAZyme
Location: 275515 - 276210 (-)
Gene ID: HRGMv2_0325_3_221
Type: CAZyme
Location: 276496 - 277548 (-)
Gene ID: HRGMv2_0325_3_222
Type: CAZyme
Location: 277573 - 278613 (-)
Gene ID: HRGMv2_0325_3_223
Type:
Location: 278610 - 280055 (-)
Gene ID: HRGMv2_0325_3_224
Type: TC
Location: 280227 - 282545 (-)
Gene ID: HRGMv2_0325_3_225
Type: pfam
Location: 282570 - 283373 (-)
Gene ID: HRGMv2_0325_3_226
Type: CAZyme
Location: 283618 - 284817 (+)
Gene ID: HRGMv2_0325_3_227
Type:
Location: 284903 - 285391 (-)
Gene ID: HRGMv2_0325_3_228
Type: CAZyme
Location: 285710 - 286879 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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