Cluster: HRGMv2_0325_CGC26
🧬 Cluster Details
- Gene Count: 22
- CAZyme Count: 14
- Substrate:
- Genome ID: HRGMv2_0325
- CGC Family ID: CGCFAM_02942
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0325_3 | HRGMv2_0325_3_119 | 129855 | 131216 | - | 1.B.5.1.9 |
| NULL(UNKNOWN) | HRGMv2_0325_3 | HRGMv2_0325_3_120 | 131788 | 132579 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_0325_3 | HRGMv2_0325_3_121 | 133483 | 134142 | - | Pribosyltran |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_122 | 134291 | 136804 | + | GH95 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_123 | 136818 | 139238 | + | GH2 |
| pfam | HRGMv2_0325_3 | HRGMv2_0325_3_124 | 139265 | 140032 | + | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_125 | 140201 | 141187 | + | GH43_18 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_126 | 141229 | 143181 | + | GH51_2 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_127 | 143195 | 144727 | + | GH51_1 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_128 | 144881 | 146407 | + | CE20 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_129 | 146432 | 147631 | + | GH105 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_130 | 147807 | 150098 | + | CBM89 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_131 | 150653 | 153532 | + | PL1_2 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_132 | 153615 | 154394 | + | CE12 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_133 | 154570 | 157455 | + | GH2 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_134 | 157452 | 160280 | + | GH106 |
| pfam | HRGMv2_0325_3 | HRGMv2_0325_3_135 | 160489 | 161970 | + | FGGY_N | FGGY_C |
| pfam | HRGMv2_0325_3 | HRGMv2_0325_3_136 | 162011 | 163261 | + | RhaA |
| TC | HRGMv2_0325_3 | HRGMv2_0325_3_137 | 163332 | 164366 | + | 2.A.7.6.1 |
| pfam | HRGMv2_0325_3 | HRGMv2_0325_3_138 | 164401 | 165210 | + | Aldolase_II |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_139 | 165241 | 166554 | + | GH105 |
| CAZyme | HRGMv2_0325_3 | HRGMv2_0325_3_140 | 166633 | 168066 | + | GH28 |
Gene ID: HRGMv2_0325_3_119
Type: TC
Location: 129855 - 131216 (-)
Type: TC
Location: 129855 - 131216 (-)
Gene ID: HRGMv2_0325_3_120
Type:
Location: 131788 - 132579 (-)
Type:
Location: 131788 - 132579 (-)
Gene ID: HRGMv2_0325_3_121
Type: STP
Location: 133483 - 134142 (-)
Type: STP
Location: 133483 - 134142 (-)
Gene ID: HRGMv2_0325_3_122
Type: CAZyme
Location: 134291 - 136804 (+)
Type: CAZyme
Location: 134291 - 136804 (+)
Gene ID: HRGMv2_0325_3_123
Type: CAZyme
Location: 136818 - 139238 (+)
Type: CAZyme
Location: 136818 - 139238 (+)
Gene ID: HRGMv2_0325_3_124
Type: pfam
Location: 139265 - 140032 (+)
Type: pfam
Location: 139265 - 140032 (+)
Gene ID: HRGMv2_0325_3_125
Type: CAZyme
Location: 140201 - 141187 (+)
Type: CAZyme
Location: 140201 - 141187 (+)
Gene ID: HRGMv2_0325_3_126
Type: CAZyme
Location: 141229 - 143181 (+)
Type: CAZyme
Location: 141229 - 143181 (+)
Gene ID: HRGMv2_0325_3_127
Type: CAZyme
Location: 143195 - 144727 (+)
Type: CAZyme
Location: 143195 - 144727 (+)
Gene ID: HRGMv2_0325_3_128
Type: CAZyme
Location: 144881 - 146407 (+)
Type: CAZyme
Location: 144881 - 146407 (+)
Gene ID: HRGMv2_0325_3_129
Type: CAZyme
Location: 146432 - 147631 (+)
Type: CAZyme
Location: 146432 - 147631 (+)
Gene ID: HRGMv2_0325_3_130
Type: CAZyme
Location: 147807 - 150098 (+)
Type: CAZyme
Location: 147807 - 150098 (+)
Gene ID: HRGMv2_0325_3_131
Type: CAZyme
Location: 150653 - 153532 (+)
Type: CAZyme
Location: 150653 - 153532 (+)
Gene ID: HRGMv2_0325_3_132
Type: CAZyme
Location: 153615 - 154394 (+)
Type: CAZyme
Location: 153615 - 154394 (+)
Gene ID: HRGMv2_0325_3_133
Type: CAZyme
Location: 154570 - 157455 (+)
Type: CAZyme
Location: 154570 - 157455 (+)
Gene ID: HRGMv2_0325_3_134
Type: CAZyme
Location: 157452 - 160280 (+)
Type: CAZyme
Location: 157452 - 160280 (+)
Gene ID: HRGMv2_0325_3_135
Type: pfam
Location: 160489 - 161970 (+)
Type: pfam
Location: 160489 - 161970 (+)
Gene ID: HRGMv2_0325_3_136
Type: pfam
Location: 162011 - 163261 (+)
Type: pfam
Location: 162011 - 163261 (+)
Gene ID: HRGMv2_0325_3_137
Type: TC
Location: 163332 - 164366 (+)
Type: TC
Location: 163332 - 164366 (+)
Gene ID: HRGMv2_0325_3_138
Type: pfam
Location: 164401 - 165210 (+)
Type: pfam
Location: 164401 - 165210 (+)
Gene ID: HRGMv2_0325_3_139
Type: CAZyme
Location: 165241 - 166554 (+)
Type: CAZyme
Location: 165241 - 166554 (+)
Gene ID: HRGMv2_0325_3_140
Type: CAZyme
Location: 166633 - 168066 (+)
Type: CAZyme
Location: 166633 - 168066 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp944325415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0325_3_129 | vegetarian > vegan | 3.35591 | 0.00565 |