Cluster: HRGMv2_0325_CGC24
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_0325
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0325_2 | HRGMv2_0325_2_379 | 467005 | 470139 | - | 2.A.6.2.22 |
| TC | HRGMv2_0325_2 | HRGMv2_0325_2_380 | 470149 | 471261 | - | 2.A.6.2.47 |
| TC | HRGMv2_0325_2 | HRGMv2_0325_2_381 | 471385 | 472401 | + | 8.A.59.2.1 |
| TF | HRGMv2_0325_2 | HRGMv2_0325_2_382 | 472398 | 473114 | + | LytTR |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_383 | 473189 | 474370 | - | GH105 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_384 | 474403 | 476589 | - | GH78 |
| pfam | HRGMv2_0325_2 | HRGMv2_0325_2_385 | 476613 | 478019 | - | Sde182_NH-like | Sde0182_C |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_386 | 478016 | 479431 | - | PL1_2 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_387 | 479468 | 482158 | - | GH3 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_388 | 482194 | 483594 | - | PL1_2 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_389 | 483654 | 484628 | - | GH43_18 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_390 | 484776 | 486452 | - | PL1_2 |
| pfam | HRGMv2_0325_2 | HRGMv2_0325_2_391 | 486469 | 487899 | - | Sde182_NH-like | Sde0182_C |
| sulfatase | HRGMv2_0325_2 | HRGMv2_0325_2_392 | 487922 | 489199 | - | S1_16 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_393 | 489222 | 490208 | - | PL10_1 |
| sulfatase | HRGMv2_0325_2 | HRGMv2_0325_2_394 | 490331 | 491749 | - | S1_8 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_395 | 491777 | 493198 | - | GH140 |
Gene ID: HRGMv2_0325_2_379
Type: TC
Location: 467005 - 470139 (-)
Type: TC
Location: 467005 - 470139 (-)
Gene ID: HRGMv2_0325_2_380
Type: TC
Location: 470149 - 471261 (-)
Type: TC
Location: 470149 - 471261 (-)
Gene ID: HRGMv2_0325_2_381
Type: TC
Location: 471385 - 472401 (+)
Type: TC
Location: 471385 - 472401 (+)
Gene ID: HRGMv2_0325_2_382
Type: TF
Location: 472398 - 473114 (+)
Type: TF
Location: 472398 - 473114 (+)
Gene ID: HRGMv2_0325_2_383
Type: CAZyme
Location: 473189 - 474370 (-)
Type: CAZyme
Location: 473189 - 474370 (-)
Gene ID: HRGMv2_0325_2_384
Type: CAZyme
Location: 474403 - 476589 (-)
Type: CAZyme
Location: 474403 - 476589 (-)
Gene ID: HRGMv2_0325_2_385
Type: pfam
Location: 476613 - 478019 (-)
Type: pfam
Location: 476613 - 478019 (-)
Gene ID: HRGMv2_0325_2_386
Type: CAZyme
Location: 478016 - 479431 (-)
Type: CAZyme
Location: 478016 - 479431 (-)
Gene ID: HRGMv2_0325_2_387
Type: CAZyme
Location: 479468 - 482158 (-)
Type: CAZyme
Location: 479468 - 482158 (-)
Gene ID: HRGMv2_0325_2_388
Type: CAZyme
Location: 482194 - 483594 (-)
Type: CAZyme
Location: 482194 - 483594 (-)
Gene ID: HRGMv2_0325_2_389
Type: CAZyme
Location: 483654 - 484628 (-)
Type: CAZyme
Location: 483654 - 484628 (-)
Gene ID: HRGMv2_0325_2_390
Type: CAZyme
Location: 484776 - 486452 (-)
Type: CAZyme
Location: 484776 - 486452 (-)
Gene ID: HRGMv2_0325_2_391
Type: pfam
Location: 486469 - 487899 (-)
Type: pfam
Location: 486469 - 487899 (-)
Gene ID: HRGMv2_0325_2_392
Type: sulfatase
Location: 487922 - 489199 (-)
Type: sulfatase
Location: 487922 - 489199 (-)
Gene ID: HRGMv2_0325_2_393
Type: CAZyme
Location: 489222 - 490208 (-)
Type: CAZyme
Location: 489222 - 490208 (-)
Gene ID: HRGMv2_0325_2_394
Type: sulfatase
Location: 490331 - 491749 (-)
Type: sulfatase
Location: 490331 - 491749 (-)
Gene ID: HRGMv2_0325_2_395
Type: CAZyme
Location: 491777 - 493198 (-)
Type: CAZyme
Location: 491777 - 493198 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp944325415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.