Cluster: HRGMv2_0325_CGC22
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0325
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_291 | 356245 | 357039 | + | GT23 |
| NULL(UNKNOWN) | HRGMv2_0325_2 | HRGMv2_0325_2_292 | 357039 | 357854 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0325_2 | HRGMv2_0325_2_293 | 357851 | 359041 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_294 | 359007 | 359861 | + | GT2 |
| pfam | HRGMv2_0325_2 | HRGMv2_0325_2_295 | 359858 | 361111 | + | UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_296 | 361146 | 362249 | + | GT4 |
| pfam | HRGMv2_0325_2 | HRGMv2_0325_2_297 | 362253 | 362843 | + | Hexapep |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_298 | 362815 | 363915 | + | GT4 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_299 | 363915 | 365165 | + | GT4 |
| pfam | HRGMv2_0325_2 | HRGMv2_0325_2_300 | 365162 | 365560 | + | Lipocalin_8 |
| TC | HRGMv2_0325_2 | HRGMv2_0325_2_301 | 365566 | 367023 | + | 1.B.73.2.2 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_302 | 367053 | 367772 | + | GT26 |
| STP | HRGMv2_0325_2 | HRGMv2_0325_2_303 | 367917 | 369116 | + | Aminotran_1_2 |
| TC | HRGMv2_0325_2 | HRGMv2_0325_2_304 | 369113 | 370360 | + | 3.A.1.125.1 |
Gene ID: HRGMv2_0325_2_291
Type: CAZyme
Location: 356245 - 357039 (+)
Type: CAZyme
Location: 356245 - 357039 (+)
Gene ID: HRGMv2_0325_2_292
Type:
Location: 357039 - 357854 (+)
Type:
Location: 357039 - 357854 (+)
Gene ID: HRGMv2_0325_2_293
Type:
Location: 357851 - 359041 (+)
Type:
Location: 357851 - 359041 (+)
Gene ID: HRGMv2_0325_2_294
Type: CAZyme
Location: 359007 - 359861 (+)
Type: CAZyme
Location: 359007 - 359861 (+)
Gene ID: HRGMv2_0325_2_295
Type: pfam
Location: 359858 - 361111 (+)
Type: pfam
Location: 359858 - 361111 (+)
Gene ID: HRGMv2_0325_2_296
Type: CAZyme
Location: 361146 - 362249 (+)
Type: CAZyme
Location: 361146 - 362249 (+)
Gene ID: HRGMv2_0325_2_297
Type: pfam
Location: 362253 - 362843 (+)
Type: pfam
Location: 362253 - 362843 (+)
Gene ID: HRGMv2_0325_2_298
Type: CAZyme
Location: 362815 - 363915 (+)
Type: CAZyme
Location: 362815 - 363915 (+)
Gene ID: HRGMv2_0325_2_299
Type: CAZyme
Location: 363915 - 365165 (+)
Type: CAZyme
Location: 363915 - 365165 (+)
Gene ID: HRGMv2_0325_2_300
Type: pfam
Location: 365162 - 365560 (+)
Type: pfam
Location: 365162 - 365560 (+)
Gene ID: HRGMv2_0325_2_301
Type: TC
Location: 365566 - 367023 (+)
Type: TC
Location: 365566 - 367023 (+)
Gene ID: HRGMv2_0325_2_302
Type: CAZyme
Location: 367053 - 367772 (+)
Type: CAZyme
Location: 367053 - 367772 (+)
Gene ID: HRGMv2_0325_2_303
Type: STP
Location: 367917 - 369116 (+)
Type: STP
Location: 367917 - 369116 (+)
Gene ID: HRGMv2_0325_2_304
Type: TC
Location: 369113 - 370360 (+)
Type: TC
Location: 369113 - 370360 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp944325415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.