Cluster: HRGMv2_0325_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0325
- CGC Family ID: CGCFAM_05979
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_220 | 259910 | 260842 | + | GT2 |
| CAZyme | HRGMv2_0325_2 | HRGMv2_0325_2_221 | 260839 | 261807 | + | GT2 |
| pfam | HRGMv2_0325_2 | HRGMv2_0325_2_222 | 261847 | 262917 | - | LptF_LptG |
| pfam | HRGMv2_0325_2 | HRGMv2_0325_2_223 | 262936 | 264066 | - | TGT |
| TC | HRGMv2_0325_2 | HRGMv2_0325_2_224 | 264373 | 266961 | + | 3.A.9.1.2 |
| TC | HRGMv2_0325_2 | HRGMv2_0325_2_225 | 267154 | 268062 | + | 2.A.7.3.28 |
Gene ID: HRGMv2_0325_2_220
Type: CAZyme
Location: 259910 - 260842 (+)
Type: CAZyme
Location: 259910 - 260842 (+)
Gene ID: HRGMv2_0325_2_221
Type: CAZyme
Location: 260839 - 261807 (+)
Type: CAZyme
Location: 260839 - 261807 (+)
Gene ID: HRGMv2_0325_2_222
Type: pfam
Location: 261847 - 262917 (-)
Type: pfam
Location: 261847 - 262917 (-)
Gene ID: HRGMv2_0325_2_223
Type: pfam
Location: 262936 - 264066 (-)
Type: pfam
Location: 262936 - 264066 (-)
Gene ID: HRGMv2_0325_2_224
Type: TC
Location: 264373 - 266961 (+)
Type: TC
Location: 264373 - 266961 (+)
Gene ID: HRGMv2_0325_2_225
Type: TC
Location: 267154 - 268062 (+)
Type: TC
Location: 267154 - 268062 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma sp944325415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.