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Cluster: HRGMv2_0317_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0317_2 HRGMv2_0317_2_158 217061 219253 - GH36
STP HRGMv2_0317_2 HRGMv2_0317_2_159 219493 220377 - PfkB
TC HRGMv2_0317_2 HRGMv2_0317_2_160 220490 221650 - 2.A.1.7.17
CAZyme HRGMv2_0317_2 HRGMv2_0317_2_161 221770 223563 - GH32
NULL(UNKNOWN) HRGMv2_0317_2 HRGMv2_0317_2_162 223753 225198 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0317_2 HRGMv2_0317_2_163 225402 227048 - GH32
pfam HRGMv2_0317_2 HRGMv2_0317_2_164 227157 228557 - DUF4960
TC HRGMv2_0317_2 HRGMv2_0317_2_165 228587 230320 - 8.A.46.1.5
TC HRGMv2_0317_2 HRGMv2_0317_2_166 230351 233455 - 1.B.14.6.1
pfam HRGMv2_0317_2 HRGMv2_0317_2_167 233782 234678 - HHH_3 | HHH_3
TC HRGMv2_0317_2 HRGMv2_0317_2_168 234834 236195 - 2.A.22.5.3
Gene ID: HRGMv2_0317_2_158
Type: CAZyme
Location: 217061 - 219253 (-)
Gene ID: HRGMv2_0317_2_159
Type: STP
Location: 219493 - 220377 (-)
Gene ID: HRGMv2_0317_2_160
Type: TC
Location: 220490 - 221650 (-)
Gene ID: HRGMv2_0317_2_161
Type: CAZyme
Location: 221770 - 223563 (-)
Gene ID: HRGMv2_0317_2_162
Type:
Location: 223753 - 225198 (-)
Gene ID: HRGMv2_0317_2_163
Type: CAZyme
Location: 225402 - 227048 (-)
Gene ID: HRGMv2_0317_2_164
Type: pfam
Location: 227157 - 228557 (-)
Gene ID: HRGMv2_0317_2_165
Type: TC
Location: 228587 - 230320 (-)
Gene ID: HRGMv2_0317_2_166
Type: TC
Location: 230351 - 233455 (-)
Gene ID: HRGMv2_0317_2_167
Type: pfam
Location: 233782 - 234678 (-)
Gene ID: HRGMv2_0317_2_168
Type: TC
Location: 234834 - 236195 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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