Cluster: HRGMv2_0317_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0317
- CGC Family ID: CGCFAM_00043
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0317_20 | HRGMv2_0317_20_43 | 43622 | 45616 | + | 2.A.67.4.2 |
| STP | HRGMv2_0317_20 | HRGMv2_0317_20_44 | 45730 | 47703 | - | HATPase_c |
| CAZyme | HRGMv2_0317_20 | HRGMv2_0317_20_45 | 48016 | 49797 | - | GH66 |
| pfam | HRGMv2_0317_20 | HRGMv2_0317_20_46 | 49802 | 51295 | - | SusE | SusF_SusE | SusF_SusE |
| TC | HRGMv2_0317_20 | HRGMv2_0317_20_47 | 51319 | 52812 | - | 8.A.46.1.3 |
| TC | HRGMv2_0317_20 | HRGMv2_0317_20_48 | 52826 | 55831 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0317_20 | HRGMv2_0317_20_49 | 56364 | 58526 | - | GH97 |
Gene ID: HRGMv2_0317_20_43
Type: TC
Location: 43622 - 45616 (+)
Type: TC
Location: 43622 - 45616 (+)
Gene ID: HRGMv2_0317_20_44
Type: STP
Location: 45730 - 47703 (-)
Type: STP
Location: 45730 - 47703 (-)
Gene ID: HRGMv2_0317_20_45
Type: CAZyme
Location: 48016 - 49797 (-)
Type: CAZyme
Location: 48016 - 49797 (-)
Gene ID: HRGMv2_0317_20_46
Type: pfam
Location: 49802 - 51295 (-)
Type: pfam
Location: 49802 - 51295 (-)
Gene ID: HRGMv2_0317_20_47
Type: TC
Location: 51319 - 52812 (-)
Type: TC
Location: 51319 - 52812 (-)
Gene ID: HRGMv2_0317_20_48
Type: TC
Location: 52826 - 55831 (-)
Type: TC
Location: 52826 - 55831 (-)
Gene ID: HRGMv2_0317_20_49
Type: CAZyme
Location: 56364 - 58526 (-)
Type: CAZyme
Location: 56364 - 58526 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.