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Cluster: HRGMv2_0317_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0317_11 HRGMv2_0317_11_62 65688 69323 + 3.A.1.201.12
TF HRGMv2_0317_11 HRGMv2_0317_11_63 69914 70261 + MerR
pfam HRGMv2_0317_11 HRGMv2_0317_11_64 70404 70817 - UPF0047
CAZyme HRGMv2_0317_11 HRGMv2_0317_11_65 70918 71886 - CE8
STP HRGMv2_0317_11 HRGMv2_0317_11_66 72014 74284 - ACT | HD
CAZyme HRGMv2_0317_11 HRGMv2_0317_11_67 74342 75682 - GH23
pfam HRGMv2_0317_11 HRGMv2_0317_11_68 75709 76470 - DUF5683
pfam HRGMv2_0317_11 HRGMv2_0317_11_69 76511 77410 - ParBc | HTH_ParB
TC HRGMv2_0317_11 HRGMv2_0317_11_70 77522 78283 - 8.A.3.2.3
pfam HRGMv2_0317_11 HRGMv2_0317_11_71 78501 79268 + SurE
CAZyme HRGMv2_0317_11 HRGMv2_0317_11_72 79432 80586 + GT19
peptidase HRGMv2_0317_11 HRGMv2_0317_11_73 80924 81982 - S09.UNW
TC HRGMv2_0317_11 HRGMv2_0317_11_74 82270 82725 + 2.A.7.1.4
pfam HRGMv2_0317_11 HRGMv2_0317_11_75 82820 83920 - DUF362
pfam HRGMv2_0317_11 HRGMv2_0317_11_76 84188 85039 - CTP_transf_1
TC HRGMv2_0317_11 HRGMv2_0317_11_77 85137 87155 - 3.A.25.1.1
Gene ID: HRGMv2_0317_11_62
Type: TC
Location: 65688 - 69323 (+)
Gene ID: HRGMv2_0317_11_63
Type: TF
Location: 69914 - 70261 (+)
Gene ID: HRGMv2_0317_11_64
Type: pfam
Location: 70404 - 70817 (-)
Gene ID: HRGMv2_0317_11_65
Type: CAZyme
Location: 70918 - 71886 (-)
Gene ID: HRGMv2_0317_11_66
Type: STP
Location: 72014 - 74284 (-)
Gene ID: HRGMv2_0317_11_67
Type: CAZyme
Location: 74342 - 75682 (-)
Gene ID: HRGMv2_0317_11_68
Type: pfam
Location: 75709 - 76470 (-)
Gene ID: HRGMv2_0317_11_69
Type: pfam
Location: 76511 - 77410 (-)
Gene ID: HRGMv2_0317_11_70
Type: TC
Location: 77522 - 78283 (-)
Gene ID: HRGMv2_0317_11_71
Type: pfam
Location: 78501 - 79268 (+)
Gene ID: HRGMv2_0317_11_72
Type: CAZyme
Location: 79432 - 80586 (+)
Gene ID: HRGMv2_0317_11_73
Type: peptidase
Location: 80924 - 81982 (-)
Gene ID: HRGMv2_0317_11_74
Type: TC
Location: 82270 - 82725 (+)
Gene ID: HRGMv2_0317_11_75
Type: pfam
Location: 82820 - 83920 (-)
Gene ID: HRGMv2_0317_11_76
Type: pfam
Location: 84188 - 85039 (-)
Gene ID: HRGMv2_0317_11_77
Type: TC
Location: 85137 - 87155 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0317_11_75 vegetarian > vegan 3.07885 0.01465

🧭 Explore Read Mapping of CGC

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