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Cluster: HRGMv2_0317_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0317_10 HRGMv2_0317_10_64 70759 72462 - CBM91 | GH43_12
CAZyme HRGMv2_0317_10 HRGMv2_0317_10_65 73375 74340 - GH43_1
CAZyme HRGMv2_0317_10 HRGMv2_0317_10_66 74440 75555 - GH10
TC HRGMv2_0317_10 HRGMv2_0317_10_67 75564 76976 - 2.A.2.3.2
CAZyme HRGMv2_0317_10 HRGMv2_0317_10_68 77214 79763 + GH115
TF HRGMv2_0317_10 HRGMv2_0317_10_69 80005 84039 + HTH_AraC
CAZyme HRGMv2_0317_10 HRGMv2_0317_10_70 84044 85969 + GH67
CAZyme HRGMv2_0317_10 HRGMv2_0317_10_71 85974 87728 + GH35
Gene ID: HRGMv2_0317_10_64
Type: CAZyme
Location: 70759 - 72462 (-)
Gene ID: HRGMv2_0317_10_65
Type: CAZyme
Location: 73375 - 74340 (-)
Gene ID: HRGMv2_0317_10_66
Type: CAZyme
Location: 74440 - 75555 (-)
Gene ID: HRGMv2_0317_10_67
Type: TC
Location: 75564 - 76976 (-)
Gene ID: HRGMv2_0317_10_68
Type: CAZyme
Location: 77214 - 79763 (+)
Gene ID: HRGMv2_0317_10_69
Type: TF
Location: 80005 - 84039 (+)
Gene ID: HRGMv2_0317_10_70
Type: CAZyme
Location: 84044 - 85969 (+)
Gene ID: HRGMv2_0317_10_71
Type: CAZyme
Location: 85974 - 87728 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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