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Cluster: HRGMv2_0317_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0317_3 HRGMv2_0317_3_31 30745 32226 + 3.A.1.30.1
pfam HRGMv2_0317_3 HRGMv2_0317_3_32 32251 32415 + FeoB_associated
pfam HRGMv2_0317_3 HRGMv2_0317_3_33 32598 34979 - UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
CAZyme HRGMv2_0317_3 HRGMv2_0317_3_34 35119 35856 - GT51
TC HRGMv2_0317_3 HRGMv2_0317_3_35 36023 36730 - 9.B.186.1.3
TC HRGMv2_0317_3 HRGMv2_0317_3_36 37775 40312 + 3.A.9.1.2
pfam HRGMv2_0317_3 HRGMv2_0317_3_37 40419 41261 - DUF5715
CAZyme HRGMv2_0317_3 HRGMv2_0317_3_38 41501 42931 - GH57
CAZyme HRGMv2_0317_3 HRGMv2_0317_3_39 42974 44248 - GT4
CAZyme HRGMv2_0317_3 HRGMv2_0317_3_40 44261 46204 - GH133
Gene ID: HRGMv2_0317_3_31
Type: TC
Location: 30745 - 32226 (+)
Gene ID: HRGMv2_0317_3_32
Type: pfam
Location: 32251 - 32415 (+)
Gene ID: HRGMv2_0317_3_33
Type: pfam
Location: 32598 - 34979 (-)
Gene ID: HRGMv2_0317_3_34
Type: CAZyme
Location: 35119 - 35856 (-)
Gene ID: HRGMv2_0317_3_35
Type: TC
Location: 36023 - 36730 (-)
Gene ID: HRGMv2_0317_3_36
Type: TC
Location: 37775 - 40312 (+)
Gene ID: HRGMv2_0317_3_37
Type: pfam
Location: 40419 - 41261 (-)
Gene ID: HRGMv2_0317_3_38
Type: CAZyme
Location: 41501 - 42931 (-)
Gene ID: HRGMv2_0317_3_39
Type: CAZyme
Location: 42974 - 44248 (-)
Gene ID: HRGMv2_0317_3_40
Type: CAZyme
Location: 44261 - 46204 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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