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Cluster: HRGMv2_0317_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0317_3 HRGMv2_0317_3_1 228 1358 - CE1
CAZyme HRGMv2_0317_3 HRGMv2_0317_3_2 1458 2471 - GH43_29
pfam HRGMv2_0317_3 HRGMv2_0317_3_3 2695 3516 + SpoU_methylase
TC HRGMv2_0317_3 HRGMv2_0317_3_4 4206 5642 - 3.D.1.8.1
TC HRGMv2_0317_3 HRGMv2_0317_3_5 5736 7241 - 3.D.1.2.1
TC HRGMv2_0317_3 HRGMv2_0317_3_6 7257 9236 - 3.D.9.1.1
TC HRGMv2_0317_3 HRGMv2_0317_3_7 9243 9551 - 3.D.1.2.1
pfam HRGMv2_0317_3 HRGMv2_0317_3_8 9558 10070 - Oxidored_q3
TC HRGMv2_0317_3 HRGMv2_0317_3_9 10086 10616 - 3.D.1.1.1
TC HRGMv2_0317_3 HRGMv2_0317_3_10 10656 11738 - 3.D.1.5.1
TC HRGMv2_0317_3 HRGMv2_0317_3_11 11872 13440 - 3.D.1.5.1
TC HRGMv2_0317_3 HRGMv2_0317_3_12 13452 14114 - 3.D.9.1.1
TC HRGMv2_0317_3 HRGMv2_0317_3_13 14105 14455 - 3.D.1.8.1
Gene ID: HRGMv2_0317_3_1
Type: CAZyme
Location: 228 - 1358 (-)
Gene ID: HRGMv2_0317_3_2
Type: CAZyme
Location: 1458 - 2471 (-)
Gene ID: HRGMv2_0317_3_3
Type: pfam
Location: 2695 - 3516 (+)
Gene ID: HRGMv2_0317_3_4
Type: TC
Location: 4206 - 5642 (-)
Gene ID: HRGMv2_0317_3_5
Type: TC
Location: 5736 - 7241 (-)
Gene ID: HRGMv2_0317_3_6
Type: TC
Location: 7257 - 9236 (-)
Gene ID: HRGMv2_0317_3_7
Type: TC
Location: 9243 - 9551 (-)
Gene ID: HRGMv2_0317_3_8
Type: pfam
Location: 9558 - 10070 (-)
Gene ID: HRGMv2_0317_3_9
Type: TC
Location: 10086 - 10616 (-)
Gene ID: HRGMv2_0317_3_10
Type: TC
Location: 10656 - 11738 (-)
Gene ID: HRGMv2_0317_3_11
Type: TC
Location: 11872 - 13440 (-)
Gene ID: HRGMv2_0317_3_12
Type: TC
Location: 13452 - 14114 (-)
Gene ID: HRGMv2_0317_3_13
Type: TC
Location: 14105 - 14455 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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