Cluster: HRGMv2_0310_CGC41
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0310
- CGC Family ID: CGCFAM_00068
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0310_32 | HRGMv2_0310_32_1 | 3 | 476 | + | 9.B.10.1.1 |
| pfam | HRGMv2_0310_32 | HRGMv2_0310_32_2 | 497 | 1516 | + | Porin_O_P | BBP2 |
| pfam | HRGMv2_0310_32 | HRGMv2_0310_32_3 | 1686 | 3350 | + | DUF6377 |
| TC | HRGMv2_0310_32 | HRGMv2_0310_32_4 | 3657 | 6647 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0310_32 | HRGMv2_0310_32_5 | 6669 | 8405 | + | SusD_RagB | SusD-like_3 |
| pfam | HRGMv2_0310_32 | HRGMv2_0310_32_6 | 8418 | 9590 | + | SusF_SusE | SusF_SusE | SusF_SusE |
| CAZyme | HRGMv2_0310_32 | HRGMv2_0310_32_7 | 9609 | 11024 | + | GH27 |
Gene ID: HRGMv2_0310_32_1
Type: TC
Location: 3 - 476 (+)
Type: TC
Location: 3 - 476 (+)
Gene ID: HRGMv2_0310_32_2
Type: pfam
Location: 497 - 1516 (+)
Type: pfam
Location: 497 - 1516 (+)
Gene ID: HRGMv2_0310_32_3
Type: pfam
Location: 1686 - 3350 (+)
Type: pfam
Location: 1686 - 3350 (+)
Gene ID: HRGMv2_0310_32_4
Type: TC
Location: 3657 - 6647 (+)
Type: TC
Location: 3657 - 6647 (+)
Gene ID: HRGMv2_0310_32_5
Type: pfam
Location: 6669 - 8405 (+)
Type: pfam
Location: 6669 - 8405 (+)
Gene ID: HRGMv2_0310_32_6
Type: pfam
Location: 8418 - 9590 (+)
Type: pfam
Location: 8418 - 9590 (+)
Gene ID: HRGMv2_0310_32_7
Type: CAZyme
Location: 9609 - 11024 (+)
Type: CAZyme
Location: 9609 - 11024 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.