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Cluster: HRGMv2_0310_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0310_26 HRGMv2_0310_26_28 36343 37239 - 3.A.1.115.1
pfam HRGMv2_0310_26 HRGMv2_0310_26_29 37589 39340 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam HRGMv2_0310_26 HRGMv2_0310_26_30 39367 39963 + Flavin_Reduct
CAZyme HRGMv2_0310_26 HRGMv2_0310_26_31 40190 42670 + GT51
TC HRGMv2_0310_26 HRGMv2_0310_26_32 42731 45118 + 3.B.1.1.6
pfam HRGMv2_0310_26 HRGMv2_0310_26_33 45281 45535 + Ribosomal_L31
pfam HRGMv2_0310_26 HRGMv2_0310_26_34 45836 46390 + Pep_deformylase
TC HRGMv2_0310_26 HRGMv2_0310_26_35 46399 46848 + 3.A.1.120.3
Gene ID: HRGMv2_0310_26_28
Type: TC
Location: 36343 - 37239 (-)
Gene ID: HRGMv2_0310_26_29
Type: pfam
Location: 37589 - 39340 (+)
Gene ID: HRGMv2_0310_26_30
Type: pfam
Location: 39367 - 39963 (+)
Gene ID: HRGMv2_0310_26_31
Type: CAZyme
Location: 40190 - 42670 (+)
Gene ID: HRGMv2_0310_26_32
Type: TC
Location: 42731 - 45118 (+)
Gene ID: HRGMv2_0310_26_33
Type: pfam
Location: 45281 - 45535 (+)
Gene ID: HRGMv2_0310_26_34
Type: pfam
Location: 45836 - 46390 (+)
Gene ID: HRGMv2_0310_26_35
Type: TC
Location: 46399 - 46848 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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