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Cluster: HRGMv2_0310_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0310_25 HRGMv2_0310_25_20 27970 28341 + 3.D.1.8.1
TC HRGMv2_0310_25 HRGMv2_0310_25_21 28332 28946 + 3.D.1.6.1
TC HRGMv2_0310_25 HRGMv2_0310_25_22 28953 30578 + 3.D.1.5.1
TC HRGMv2_0310_25 HRGMv2_0310_25_23 30618 31697 + 3.D.1.5.1
TC HRGMv2_0310_25 HRGMv2_0310_25_24 31726 33228 + 3.A.2.1.2
pfam HRGMv2_0310_25 HRGMv2_0310_25_25 33236 33472 + ATP-synt_DE_N
TC HRGMv2_0310_25 HRGMv2_0310_25_26 33509 34885 + 3.A.2.1.6
TC HRGMv2_0310_25 HRGMv2_0310_25_27 34926 35195 + 3.A.2.1.6
pfam HRGMv2_0310_25 HRGMv2_0310_25_28 35276 35770 + ATP-synt_B | Mt_ATP-synt_B
pfam HRGMv2_0310_25 HRGMv2_0310_25_29 35775 36323 + OSCP
TC HRGMv2_0310_25 HRGMv2_0310_25_30 36325 37908 + 3.A.2.1.3
TC HRGMv2_0310_25 HRGMv2_0310_25_31 37928 38803 + 3.A.2.1.1
STP HRGMv2_0310_25 HRGMv2_0310_25_32 38845 39393 + Fer4 | Fer4
pfam HRGMv2_0310_25 HRGMv2_0310_25_33 39434 39961 + Oxidored_q3
TC HRGMv2_0310_25 HRGMv2_0310_25_34 39967 40278 + 3.D.1.2.1
TC HRGMv2_0310_25 HRGMv2_0310_25_35 40281 42266 + 3.D.1.2.1
TC HRGMv2_0310_25 HRGMv2_0310_25_36 42293 43810 + 3.D.1.2.1
TC HRGMv2_0310_25 HRGMv2_0310_25_37 43838 45301 + 3.D.9.1.1
CAZyme HRGMv2_0310_25 HRGMv2_0310_25_38 45616 47568 + GH133
CAZyme HRGMv2_0310_25 HRGMv2_0310_25_39 47599 48846 + GT4
CAZyme HRGMv2_0310_25 HRGMv2_0310_25_40 49193 50653 + GH57
Gene ID: HRGMv2_0310_25_20
Type: TC
Location: 27970 - 28341 (+)
Gene ID: HRGMv2_0310_25_21
Type: TC
Location: 28332 - 28946 (+)
Gene ID: HRGMv2_0310_25_22
Type: TC
Location: 28953 - 30578 (+)
Gene ID: HRGMv2_0310_25_23
Type: TC
Location: 30618 - 31697 (+)
Gene ID: HRGMv2_0310_25_24
Type: TC
Location: 31726 - 33228 (+)
Gene ID: HRGMv2_0310_25_25
Type: pfam
Location: 33236 - 33472 (+)
Gene ID: HRGMv2_0310_25_26
Type: TC
Location: 33509 - 34885 (+)
Gene ID: HRGMv2_0310_25_27
Type: TC
Location: 34926 - 35195 (+)
Gene ID: HRGMv2_0310_25_28
Type: pfam
Location: 35276 - 35770 (+)
Gene ID: HRGMv2_0310_25_29
Type: pfam
Location: 35775 - 36323 (+)
Gene ID: HRGMv2_0310_25_30
Type: TC
Location: 36325 - 37908 (+)
Gene ID: HRGMv2_0310_25_31
Type: TC
Location: 37928 - 38803 (+)
Gene ID: HRGMv2_0310_25_32
Type: STP
Location: 38845 - 39393 (+)
Gene ID: HRGMv2_0310_25_33
Type: pfam
Location: 39434 - 39961 (+)
Gene ID: HRGMv2_0310_25_34
Type: TC
Location: 39967 - 40278 (+)
Gene ID: HRGMv2_0310_25_35
Type: TC
Location: 40281 - 42266 (+)
Gene ID: HRGMv2_0310_25_36
Type: TC
Location: 42293 - 43810 (+)
Gene ID: HRGMv2_0310_25_37
Type: TC
Location: 43838 - 45301 (+)
Gene ID: HRGMv2_0310_25_38
Type: CAZyme
Location: 45616 - 47568 (+)
Gene ID: HRGMv2_0310_25_39
Type: CAZyme
Location: 47599 - 48846 (+)
Gene ID: HRGMv2_0310_25_40
Type: CAZyme
Location: 49193 - 50653 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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