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Cluster: HRGMv2_0310_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0310_23 HRGMv2_0310_23_31 35869 38925 - 1.B.14.6.1
TF HRGMv2_0310_23 HRGMv2_0310_23_32 38970 42920 - HTH_AraC
sulfatase HRGMv2_0310_23 HRGMv2_0310_23_33 43207 44376 - S1_27
TC HRGMv2_0310_23 HRGMv2_0310_23_34 44398 45363 - 2.A.19.5.2
pfam HRGMv2_0310_23 HRGMv2_0310_23_35 46071 47033 + DUF362
TC HRGMv2_0310_23 HRGMv2_0310_23_36 47040 48962 + 1.B.14.3.1
CAZyme HRGMv2_0310_23 HRGMv2_0310_23_37 49072 50922 + GH128
NULL(UNKNOWN) HRGMv2_0310_23 HRGMv2_0310_23_38 51109 51261 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0310_23 HRGMv2_0310_23_39 51372 52598 + GH88
Gene ID: HRGMv2_0310_23_31
Type: TC
Location: 35869 - 38925 (-)
Gene ID: HRGMv2_0310_23_32
Type: TF
Location: 38970 - 42920 (-)
Gene ID: HRGMv2_0310_23_33
Type: sulfatase
Location: 43207 - 44376 (-)
Gene ID: HRGMv2_0310_23_34
Type: TC
Location: 44398 - 45363 (-)
Gene ID: HRGMv2_0310_23_35
Type: pfam
Location: 46071 - 47033 (+)
Gene ID: HRGMv2_0310_23_36
Type: TC
Location: 47040 - 48962 (+)
Gene ID: HRGMv2_0310_23_37
Type: CAZyme
Location: 49072 - 50922 (+)
Gene ID: HRGMv2_0310_23_38
Type:
Location: 51109 - 51261 (-)
Gene ID: HRGMv2_0310_23_39
Type: CAZyme
Location: 51372 - 52598 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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