Cluster: HRGMv2_0310_CGC30
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_0310
- CGC Family ID: CGCFAM_01593
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0310_21 | HRGMv2_0310_21_20 | 20066 | 21145 | - | GT4 |
| CAZyme | HRGMv2_0310_21 | HRGMv2_0310_21_21 | 21181 | 22026 | - | GT2 |
| pfam | HRGMv2_0310_21 | HRGMv2_0310_21_22 | 22214 | 23710 | + | Phosphodiest | Metalloenzyme | iPGM_N |
| sulfatase | HRGMv2_0310_21 | HRGMv2_0310_21_23 | 23710 | 25284 | + | S1_14 |
| CAZyme | HRGMv2_0310_21 | HRGMv2_0310_21_24 | 25288 | 26475 | + | GH3 |
| CAZyme | HRGMv2_0310_21 | HRGMv2_0310_21_25 | 26552 | 27547 | - | GH43_34 |
| STP | HRGMv2_0310_21 | HRGMv2_0310_21_26 | 27599 | 28618 | - | FecR |
| STP | HRGMv2_0310_21 | HRGMv2_0310_21_27 | 28624 | 29214 | - | Sigma70_r2 | Sigma70_r4_2 |
| TC | HRGMv2_0310_21 | HRGMv2_0310_21_28 | 29422 | 32721 | + | 1.B.14.6.1 |
| TC | HRGMv2_0310_21 | HRGMv2_0310_21_29 | 32739 | 34478 | + | 8.A.46.1.1 |
| pfam | HRGMv2_0310_21 | HRGMv2_0310_21_30 | 34536 | 36092 | + | SusF_SusE | SusF_SusE |
| CAZyme | HRGMv2_0310_21 | HRGMv2_0310_21_31 | 36115 | 37545 | + | GH27 |
| pfam | HRGMv2_0310_21 | HRGMv2_0310_21_32 | 37596 | 38888 | + | SusF_SusE | SusF_SusE |
| CAZyme | HRGMv2_0310_21 | HRGMv2_0310_21_33 | 39039 | 41294 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_0310_21 | HRGMv2_0310_21_34 | 41291 | 43474 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0310_21 | HRGMv2_0310_21_35 | 43448 | 44128 | - | RadC | UPF0758_N |
| CAZyme | HRGMv2_0310_21 | HRGMv2_0310_21_36 | 44125 | 45171 | - | GT2 |
Gene ID: HRGMv2_0310_21_20
Type: CAZyme
Location: 20066 - 21145 (-)
Type: CAZyme
Location: 20066 - 21145 (-)
Gene ID: HRGMv2_0310_21_21
Type: CAZyme
Location: 21181 - 22026 (-)
Type: CAZyme
Location: 21181 - 22026 (-)
Gene ID: HRGMv2_0310_21_22
Type: pfam
Location: 22214 - 23710 (+)
Type: pfam
Location: 22214 - 23710 (+)
Gene ID: HRGMv2_0310_21_23
Type: sulfatase
Location: 23710 - 25284 (+)
Type: sulfatase
Location: 23710 - 25284 (+)
Gene ID: HRGMv2_0310_21_24
Type: CAZyme
Location: 25288 - 26475 (+)
Type: CAZyme
Location: 25288 - 26475 (+)
Gene ID: HRGMv2_0310_21_25
Type: CAZyme
Location: 26552 - 27547 (-)
Type: CAZyme
Location: 26552 - 27547 (-)
Gene ID: HRGMv2_0310_21_26
Type: STP
Location: 27599 - 28618 (-)
Type: STP
Location: 27599 - 28618 (-)
Gene ID: HRGMv2_0310_21_27
Type: STP
Location: 28624 - 29214 (-)
Type: STP
Location: 28624 - 29214 (-)
Gene ID: HRGMv2_0310_21_28
Type: TC
Location: 29422 - 32721 (+)
Type: TC
Location: 29422 - 32721 (+)
Gene ID: HRGMv2_0310_21_29
Type: TC
Location: 32739 - 34478 (+)
Type: TC
Location: 32739 - 34478 (+)
Gene ID: HRGMv2_0310_21_30
Type: pfam
Location: 34536 - 36092 (+)
Type: pfam
Location: 34536 - 36092 (+)
Gene ID: HRGMv2_0310_21_31
Type: CAZyme
Location: 36115 - 37545 (+)
Type: CAZyme
Location: 36115 - 37545 (+)
Gene ID: HRGMv2_0310_21_32
Type: pfam
Location: 37596 - 38888 (+)
Type: pfam
Location: 37596 - 38888 (+)
Gene ID: HRGMv2_0310_21_33
Type: CAZyme
Location: 39039 - 41294 (+)
Type: CAZyme
Location: 39039 - 41294 (+)
Gene ID: HRGMv2_0310_21_34
Type:
Location: 41291 - 43474 (+)
Type:
Location: 41291 - 43474 (+)
Gene ID: HRGMv2_0310_21_35
Type: pfam
Location: 43448 - 44128 (-)
Type: pfam
Location: 43448 - 44128 (-)
Gene ID: HRGMv2_0310_21_36
Type: CAZyme
Location: 44125 - 45171 (-)
Type: CAZyme
Location: 44125 - 45171 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.