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Cluster: HRGMv2_0310_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0310_18 HRGMv2_0310_18_22 26197 26892 - 2.A.122.1.1
TC HRGMv2_0310_18 HRGMv2_0310_18_23 26897 27256 - 1.E.14.1.13
CAZyme HRGMv2_0310_18 HRGMv2_0310_18_24 27478 30030 - GH115
pfam HRGMv2_0310_18 HRGMv2_0310_18_25 30130 31470 - AAA_14 | DUF4143
NULL(UNKNOWN) HRGMv2_0310_18 HRGMv2_0310_18_26 31528 31761 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0310_18 HRGMv2_0310_18_27 31653 32615 - GH43_34
pfam HRGMv2_0310_18 HRGMv2_0310_18_28 32700 33644 - Exo_endo_phos
CAZyme HRGMv2_0310_18 HRGMv2_0310_18_29 33671 35134 - GH125
Gene ID: HRGMv2_0310_18_22
Type: TC
Location: 26197 - 26892 (-)
Gene ID: HRGMv2_0310_18_23
Type: TC
Location: 26897 - 27256 (-)
Gene ID: HRGMv2_0310_18_24
Type: CAZyme
Location: 27478 - 30030 (-)
Gene ID: HRGMv2_0310_18_25
Type: pfam
Location: 30130 - 31470 (-)
Gene ID: HRGMv2_0310_18_26
Type:
Location: 31528 - 31761 (+)
Gene ID: HRGMv2_0310_18_27
Type: CAZyme
Location: 31653 - 32615 (-)
Gene ID: HRGMv2_0310_18_28
Type: pfam
Location: 32700 - 33644 (-)
Gene ID: HRGMv2_0310_18_29
Type: CAZyme
Location: 33671 - 35134 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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