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Cluster: HRGMv2_0310_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0310_16 HRGMv2_0310_16_2 1608 2924 + GT30
STP HRGMv2_0310_16 HRGMv2_0310_16_3 2934 3479 + Pribosyltran
pfam HRGMv2_0310_16 HRGMv2_0310_16_4 3565 4173 + ADK | AAA_17 | AAA_33
TC HRGMv2_0310_16 HRGMv2_0310_16_5 4236 6224 + 1.B.6.1.14
TC HRGMv2_0310_16 HRGMv2_0310_16_6 6340 7095 + 3.A.1.3.15
pfam HRGMv2_0310_16 HRGMv2_0310_16_7 7092 8378 + SUFBD_core | SufBD_N | SufBD_N
STP HRGMv2_0310_16 HRGMv2_0310_16_8 8378 9589 + Aminotran_1_2
TC HRGMv2_0310_16 HRGMv2_0310_16_9 9591 10787 + 2.A.23.2.7
Gene ID: HRGMv2_0310_16_2
Type: CAZyme
Location: 1608 - 2924 (+)
Gene ID: HRGMv2_0310_16_3
Type: STP
Location: 2934 - 3479 (+)
Gene ID: HRGMv2_0310_16_4
Type: pfam
Location: 3565 - 4173 (+)
Gene ID: HRGMv2_0310_16_5
Type: TC
Location: 4236 - 6224 (+)
Gene ID: HRGMv2_0310_16_6
Type: TC
Location: 6340 - 7095 (+)
Gene ID: HRGMv2_0310_16_7
Type: pfam
Location: 7092 - 8378 (+)
Gene ID: HRGMv2_0310_16_8
Type: STP
Location: 8378 - 9589 (+)
Gene ID: HRGMv2_0310_16_9
Type: TC
Location: 9591 - 10787 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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