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Cluster: HRGMv2_0310_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0310_15 HRGMv2_0310_15_29 34381 37536 + 1.B.14.6.1
pfam HRGMv2_0310_15 HRGMv2_0310_15_30 37552 39243 + SusD_RagB | SusD-like_3
pfam HRGMv2_0310_15 HRGMv2_0310_15_31 39261 40670 + SGBP_B_XBD
CAZyme HRGMv2_0310_15 HRGMv2_0310_15_32 40707 43022 + GH10
CAZyme HRGMv2_0310_15 HRGMv2_0310_15_33 43114 44820 + GH35
TC HRGMv2_0310_15 HRGMv2_0310_15_34 44853 46289 + 2.A.2.3.2
CAZyme HRGMv2_0310_15 HRGMv2_0310_15_35 46321 47451 + GH10
CAZyme HRGMv2_0310_15 HRGMv2_0310_15_36 47469 48440 + GH43_1
CAZyme HRGMv2_0310_15 HRGMv2_0310_15_37 48437 50191 + GH67
Gene ID: HRGMv2_0310_15_29
Type: TC
Location: 34381 - 37536 (+)
Gene ID: HRGMv2_0310_15_30
Type: pfam
Location: 37552 - 39243 (+)
Gene ID: HRGMv2_0310_15_31
Type: pfam
Location: 39261 - 40670 (+)
Gene ID: HRGMv2_0310_15_32
Type: CAZyme
Location: 40707 - 43022 (+)
Gene ID: HRGMv2_0310_15_33
Type: CAZyme
Location: 43114 - 44820 (+)
Gene ID: HRGMv2_0310_15_34
Type: TC
Location: 44853 - 46289 (+)
Gene ID: HRGMv2_0310_15_35
Type: CAZyme
Location: 46321 - 47451 (+)
Gene ID: HRGMv2_0310_15_36
Type: CAZyme
Location: 47469 - 48440 (+)
Gene ID: HRGMv2_0310_15_37
Type: CAZyme
Location: 48437 - 50191 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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