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Cluster: HRGMv2_0310_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0310_7 HRGMv2_0310_7_13 11513 12793 + 9.A.40.2.2
STP HRGMv2_0310_7 HRGMv2_0310_7_14 13006 13512 + Sigma70_r2 | Sigma70_r4_2
TC HRGMv2_0310_7 HRGMv2_0310_7_15 13739 14992 + 2.A.1.2.97
pfam HRGMv2_0310_7 HRGMv2_0310_7_16 15098 16111 + Acyl_transf_3
TC HRGMv2_0310_7 HRGMv2_0310_7_17 16367 18211 + 3.A.1.106.1
CAZyme HRGMv2_0310_7 HRGMv2_0310_7_18 18370 19584 + GH26
CAZyme HRGMv2_0310_7 HRGMv2_0310_7_19 19631 20800 + GH130_1
TC HRGMv2_0310_7 HRGMv2_0310_7_20 20811 22322 + 2.A.2.3.4
Gene ID: HRGMv2_0310_7_13
Type: TC
Location: 11513 - 12793 (+)
Gene ID: HRGMv2_0310_7_14
Type: STP
Location: 13006 - 13512 (+)
Gene ID: HRGMv2_0310_7_15
Type: TC
Location: 13739 - 14992 (+)
Gene ID: HRGMv2_0310_7_16
Type: pfam
Location: 15098 - 16111 (+)
Gene ID: HRGMv2_0310_7_17
Type: TC
Location: 16367 - 18211 (+)
Gene ID: HRGMv2_0310_7_18
Type: CAZyme
Location: 18370 - 19584 (+)
Gene ID: HRGMv2_0310_7_19
Type: CAZyme
Location: 19631 - 20800 (+)
Gene ID: HRGMv2_0310_7_20
Type: TC
Location: 20811 - 22322 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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