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Cluster: HRGMv2_0298_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0298_42 HRGMv2_0298_42_1 119 1978 - 2.A.47.4.8
CAZyme HRGMv2_0298_42 HRGMv2_0298_42_2 2468 4717 - CBM67 | GH78
TC HRGMv2_0298_42 HRGMv2_0298_42_3 5146 5466 - 2.A.7.1.4
TC HRGMv2_0298_42 HRGMv2_0298_42_4 5638 6795 - 3.B.1.1.2
TC HRGMv2_0298_42 HRGMv2_0298_42_5 6805 7290 - 3.B.1.1.2
NULL(UNKNOWN) HRGMv2_0298_42 HRGMv2_0298_42_6 7320 7589 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0298_42 HRGMv2_0298_42_7 7703 8623 - OAD_gamma
TC HRGMv2_0298_42 HRGMv2_0298_42_8 8644 10197 - 3.B.1.1.2
TC HRGMv2_0298_42 HRGMv2_0298_42_9 10552 11604 - 3.A.1.13.2
TC HRGMv2_0298_42 HRGMv2_0298_42_10 11645 12778 - 3.A.1.13.2
NULL(UNKNOWN) HRGMv2_0298_42 HRGMv2_0298_42_11 13218 13607 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0298_42 HRGMv2_0298_42_12 13705 14031 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0298_42 HRGMv2_0298_42_13 14557 17175 - GH5_13
Gene ID: HRGMv2_0298_42_1
Type: TC
Location: 119 - 1978 (-)
Gene ID: HRGMv2_0298_42_2
Type: CAZyme
Location: 2468 - 4717 (-)
Gene ID: HRGMv2_0298_42_3
Type: TC
Location: 5146 - 5466 (-)
Gene ID: HRGMv2_0298_42_4
Type: TC
Location: 5638 - 6795 (-)
Gene ID: HRGMv2_0298_42_5
Type: TC
Location: 6805 - 7290 (-)
Gene ID: HRGMv2_0298_42_6
Type:
Location: 7320 - 7589 (-)
Gene ID: HRGMv2_0298_42_7
Type: pfam
Location: 7703 - 8623 (-)
Gene ID: HRGMv2_0298_42_8
Type: TC
Location: 8644 - 10197 (-)
Gene ID: HRGMv2_0298_42_9
Type: TC
Location: 10552 - 11604 (-)
Gene ID: HRGMv2_0298_42_10
Type: TC
Location: 11645 - 12778 (-)
Gene ID: HRGMv2_0298_42_11
Type:
Location: 13218 - 13607 (-)
Gene ID: HRGMv2_0298_42_12
Type:
Location: 13705 - 14031 (+)
Gene ID: HRGMv2_0298_42_13
Type: CAZyme
Location: 14557 - 17175 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0298_42_11 vegan > omnivore 1.05998 0.01557

🧭 Explore Read Mapping of CGC

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