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Cluster: HRGMv2_0298_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0298_23 HRGMv2_0298_23_22 23068 24222 + 3.D.5.1.1
pfam HRGMv2_0298_23 HRGMv2_0298_23_23 24233 24937 + FMN_bind
TC HRGMv2_0298_23 HRGMv2_0298_23_24 25021 25644 + 3.D.5.1.1
TC HRGMv2_0298_23 HRGMv2_0298_23_25 25751 26377 + 3.D.5.1.1
TC HRGMv2_0298_23 HRGMv2_0298_23_26 26395 27684 + 3.D.5.1.1
TC HRGMv2_0298_23 HRGMv2_0298_23_27 28453 29604 + 8.A.1.6.3
TC HRGMv2_0298_23 HRGMv2_0298_23_28 29781 32987 + 2.A.6.2.22
TC HRGMv2_0298_23 HRGMv2_0298_23_29 33001 34416 + 2.A.6.2.23
pfam HRGMv2_0298_23 HRGMv2_0298_23_30 34453 35226 + Hexapep | Hexapep | Hexapep | Acetyltransf_11
CAZyme HRGMv2_0298_23 HRGMv2_0298_23_31 35710 36612 - GH73
Gene ID: HRGMv2_0298_23_22
Type: TC
Location: 23068 - 24222 (+)
Gene ID: HRGMv2_0298_23_23
Type: pfam
Location: 24233 - 24937 (+)
Gene ID: HRGMv2_0298_23_24
Type: TC
Location: 25021 - 25644 (+)
Gene ID: HRGMv2_0298_23_25
Type: TC
Location: 25751 - 26377 (+)
Gene ID: HRGMv2_0298_23_26
Type: TC
Location: 26395 - 27684 (+)
Gene ID: HRGMv2_0298_23_27
Type: TC
Location: 28453 - 29604 (+)
Gene ID: HRGMv2_0298_23_28
Type: TC
Location: 29781 - 32987 (+)
Gene ID: HRGMv2_0298_23_29
Type: TC
Location: 33001 - 34416 (+)
Gene ID: HRGMv2_0298_23_30
Type: pfam
Location: 34453 - 35226 (+)
Gene ID: HRGMv2_0298_23_31
Type: CAZyme
Location: 35710 - 36612 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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