Cluster: HRGMv2_0298_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0298
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0298_2 | HRGMv2_0298_2_22 | 26230 | 27612 | - | 2.A.22.5.3 |
| NULL(UNKNOWN) | HRGMv2_0298_2 | HRGMv2_0298_2_23 | 27857 | 28252 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_0298_2 | HRGMv2_0298_2_24 | 28518 | 29327 | - | M48.UPC |
| TC | HRGMv2_0298_2 | HRGMv2_0298_2_25 | 29632 | 32136 | - | 1.B.14.8.7 |
| NULL(UNKNOWN) | HRGMv2_0298_2 | HRGMv2_0298_2_26 | 32249 | 32392 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0298_2 | HRGMv2_0298_2_27 | 32691 | 35150 | + | GH3 |
| TF | HRGMv2_0298_2 | HRGMv2_0298_2_28 | 35447 | 36097 | - | GerE |
| STP | HRGMv2_0298_2 | HRGMv2_0298_2_29 | 36216 | 37598 | + | AAA |
| TC | HRGMv2_0298_2 | HRGMv2_0298_2_30 | 38495 | 39064 | - | 9.B.18.1.2 |
| pfam | HRGMv2_0298_2 | HRGMv2_0298_2_31 | 39082 | 40311 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| CAZyme | HRGMv2_0298_2 | HRGMv2_0298_2_32 | 40316 | 41470 | - | GT4 |
| CAZyme | HRGMv2_0298_2 | HRGMv2_0298_2_33 | 41486 | 42568 | - | GT4 |
Gene ID: HRGMv2_0298_2_22
Type: TC
Location: 26230 - 27612 (-)
Type: TC
Location: 26230 - 27612 (-)
Gene ID: HRGMv2_0298_2_23
Type:
Location: 27857 - 28252 (+)
Type:
Location: 27857 - 28252 (+)
Gene ID: HRGMv2_0298_2_24
Type: peptidase
Location: 28518 - 29327 (-)
Type: peptidase
Location: 28518 - 29327 (-)
Gene ID: HRGMv2_0298_2_25
Type: TC
Location: 29632 - 32136 (-)
Type: TC
Location: 29632 - 32136 (-)
Gene ID: HRGMv2_0298_2_26
Type:
Location: 32249 - 32392 (+)
Type:
Location: 32249 - 32392 (+)
Gene ID: HRGMv2_0298_2_27
Type: CAZyme
Location: 32691 - 35150 (+)
Type: CAZyme
Location: 32691 - 35150 (+)
Gene ID: HRGMv2_0298_2_28
Type: TF
Location: 35447 - 36097 (-)
Type: TF
Location: 35447 - 36097 (-)
Gene ID: HRGMv2_0298_2_29
Type: STP
Location: 36216 - 37598 (+)
Type: STP
Location: 36216 - 37598 (+)
Gene ID: HRGMv2_0298_2_30
Type: TC
Location: 38495 - 39064 (-)
Type: TC
Location: 38495 - 39064 (-)
Gene ID: HRGMv2_0298_2_31
Type: pfam
Location: 39082 - 40311 (-)
Type: pfam
Location: 39082 - 40311 (-)
Gene ID: HRGMv2_0298_2_32
Type: CAZyme
Location: 40316 - 41470 (-)
Type: CAZyme
Location: 40316 - 41470 (-)
Gene ID: HRGMv2_0298_2_33
Type: CAZyme
Location: 41486 - 42568 (-)
Type: CAZyme
Location: 41486 - 42568 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
UBA6398
Species
UBA6398 sp900555645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.