dbCAN Logo

Cluster: HRGMv2_0298_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0298_17 HRGMv2_0298_17_2 1211 2740 + 1.B.9.4.2
pfam HRGMv2_0298_17 HRGMv2_0298_17_3 3014 3841 + RuvA_N | RuvA_C | HHH_5
TC HRGMv2_0298_17 HRGMv2_0298_17_4 3921 11324 + 9.A.25.1.1
TC HRGMv2_0298_17 HRGMv2_0298_17_5 12144 12368 + 2.A.64.5.1
TC HRGMv2_0298_17 HRGMv2_0298_17_6 12404 13210 + 2.A.64.1.3
pfam HRGMv2_0298_17 HRGMv2_0298_17_7 13258 14331 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_0298_17 HRGMv2_0298_17_8 14419 15894 + GH109
Gene ID: HRGMv2_0298_17_2
Type: TC
Location: 1211 - 2740 (+)
Gene ID: HRGMv2_0298_17_3
Type: pfam
Location: 3014 - 3841 (+)
Gene ID: HRGMv2_0298_17_4
Type: TC
Location: 3921 - 11324 (+)
Gene ID: HRGMv2_0298_17_5
Type: TC
Location: 12144 - 12368 (+)
Gene ID: HRGMv2_0298_17_6
Type: TC
Location: 12404 - 13210 (+)
Gene ID: HRGMv2_0298_17_7
Type: pfam
Location: 13258 - 14331 (+)
Gene ID: HRGMv2_0298_17_8
Type: CAZyme
Location: 14419 - 15894 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List