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Cluster: HRGMv2_0298_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0298_12 HRGMv2_0298_12_25 38686 40890 + 3.A.10.1.10
STP HRGMv2_0298_12 HRGMv2_0298_12_26 41380 42510 + ATPase_2
TC HRGMv2_0298_12 HRGMv2_0298_12_27 43017 44675 + 2.A.3.3.22
STP HRGMv2_0298_12 HRGMv2_0298_12_28 44698 45579 + PfkB
pfam HRGMv2_0298_12 HRGMv2_0298_12_29 45718 46416 - SIMPL
TC HRGMv2_0298_12 HRGMv2_0298_12_30 46886 48547 - 2.A.81.1.2
pfam HRGMv2_0298_12 HRGMv2_0298_12_31 48967 50493 + tRNA-synt_1c | Anticodon_2
CAZyme HRGMv2_0298_12 HRGMv2_0298_12_32 50503 51720 + GT30
Gene ID: HRGMv2_0298_12_25
Type: TC
Location: 38686 - 40890 (+)
Gene ID: HRGMv2_0298_12_26
Type: STP
Location: 41380 - 42510 (+)
Gene ID: HRGMv2_0298_12_27
Type: TC
Location: 43017 - 44675 (+)
Gene ID: HRGMv2_0298_12_28
Type: STP
Location: 44698 - 45579 (+)
Gene ID: HRGMv2_0298_12_29
Type: pfam
Location: 45718 - 46416 (-)
Gene ID: HRGMv2_0298_12_30
Type: TC
Location: 46886 - 48547 (-)
Gene ID: HRGMv2_0298_12_31
Type: pfam
Location: 48967 - 50493 (+)
Gene ID: HRGMv2_0298_12_32
Type: CAZyme
Location: 50503 - 51720 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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